Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC130304.1-201ENST00000622942 2385 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC015689.2-201ENST00000528172 1738 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 PARP4P2-201ENST00000446672 3326 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 BCORP1-203ENST00000513194 5093 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 MIR620-201ENST00000385232 95 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 Z86062.1-201ENST00000406773 777 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 RN7SKP17-201ENST00000411242 351 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 NMD3P2-201ENST00000421815 761 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AL034379.1-201ENST00000423216 253 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 UBE2D3P3-201ENST00000426992 425 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AC099677.3-201ENST00000427081 395 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AC090058.1-201ENST00000498788 435 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AC021087.2-201ENST00000504656 1203 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 RN7SKP288-201ENST00000516227 268 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 IGLVIV-64-201ENST00000518581 301 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 WBP1LP3-201ENST00000523033 208 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 MIR4776-2-201ENST00000580204 80 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AP000943.4-201ENST00000622912 357 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AC005224.3-201ENST00000584683 2140 ntBASIC7.03□□□□□ -1.28
CHMP4CQ96CF2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 RNA5SP211-201ENST00000365516 117 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AL353692.2-201ENST00000407054 335 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 RPL35AP3-201ENST00000414680 288 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 MRPS21P2-201ENST00000424704 264 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 GAPDHP75-201ENST00000433910 943 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 SDC4P-201ENST00000453285 601 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC104164.1-201ENST00000460282 590 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AL603882.1-201ENST00000463059 681 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 RPSAP39-201ENST00000467439 883 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 PFN1P6-201ENST00000476786 399 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC008629.2-201ENST00000503783 483 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 PRMT5P1-201ENST00000514351 598 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC022826.1-201ENST00000519383 805 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC068339.2-201ENST00000534395 618 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC027544.3-201ENST00000535082 757 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms