Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 SNORA81.2-201ENST00000516868 170 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AC078899.1-201ENST00000521432 1185 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AC104115.2-201ENST00000523026 687 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.52□□□□□ -1.37
HPS3Q969F9 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.52□□□□□ -1.37
HPS3Q969F9 AC008126.1-201ENST00000549019 480 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.52□□□□□ -1.37
HPS3Q969F9 AC090826.1-203ENST00000569235 490 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.52□□□□□ -1.37
HPS3Q969F9 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.52□□□□□ -1.37
HPS3Q969F9 CBX3P2-202ENST00000583365 535 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AC008507.3-201ENST00000585753 472 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.52□□□□□ -1.37
HPS3Q969F9 AL138960.1-201ENST00000613838 513 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AC010608.3-201ENST00000625048 527 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.52□□□□□ -1.37
HPS3Q969F9 AC009452.1-201ENST00000640823 606 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HPS3Q969F9 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.52□□□□□ -1.37
HPS3Q969F9 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HPS3Q969F9 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.52□□□□□ -1.37
HPS3Q969F9 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HPS3Q969F9 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.51□□□□□ -1.37
HPS3Q969F9 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 OR7E156P-201ENST00000400303 464 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS3Q969F9 AC013262.1-201ENST00000426710 252 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AL160175.1-201ENST00000428124 247 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 BX323845.3-201ENST00000428215 527 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AC073410.1-201ENST00000435125 589 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.51□□□□□ -1.37
HPS3Q969F9 MTCYBP29-201ENST00000436327 1006 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS3Q969F9 RPL6P5-201ENST00000445678 828 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 GEMIN2P1-201ENST00000454246 752 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 OSTCP1-201ENST00000455507 450 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AC009963.3-201ENST00000458090 486 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AC068228.1-201ENST00000461723 211 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AC008379.1-201ENST00000463655 464 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.51□□□□□ -1.37
HPS3Q969F9 CR383656.1-201ENST00000484916 377 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS3Q969F9 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.51□□□□□ -1.37
HPS3Q969F9 OR5H7P-201ENST00000514084 930 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 NPM1P42-201ENST00000560329 862 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AC007346.2-201ENST00000564816 892 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 LINC00556-201ENST00000569603 412 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 AC005244.1-201ENST00000582566 339 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.51□□□□□ -1.37
HPS3Q969F9 AC005034.4-201ENST00000603612 899 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AC073137.1-201ENST00000605636 634 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 AC004241.3-201ENST00000611728 517 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 AL352984.2-202ENST00000613699 155 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 KARSP1-201ENST00000451871 1752 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.51□□□□□ -1.37
HPS3Q969F9 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 MFSD8-239ENST00000641590 2479 ntBASIC6.51□□□□□ -1.37
HPS3Q969F9 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HPS3Q969F9 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS3Q969F9 AL359715.4-201ENST00000606629 1436 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 QRSL1P1-201ENST00000400977 1540 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS3Q969F9 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS3Q969F9 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS3Q969F9 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS3Q969F9 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.5□□□□□ -1.37
HPS3Q969F9 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 MTND5P23-201ENST00000430812 1655 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms