Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AC010503.3-201ENST00000594355 540 ntBASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AC132068.1-201ENST00000623805 459 ntBASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AP001962.1-201ENST00000624114 559 ntBASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AC099654.6-201ENST00000636487 512 ntBASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 XKRY2-202ENST00000623874 1581 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 XKRY-202ENST00000624960 1581 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AL031985.1-201ENST00000392713 418 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 RN7SKP286-201ENST00000410894 299 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AKR1B10P1-201ENST00000425765 942 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 MORF4L2P1-201ENST00000503761 858 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AC109464.1-201ENST00000511091 819 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 MTND6P2-201ENST00000512226 524 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 RN7SKP99-201ENST00000517028 307 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 FO393422.1-201ENST00000603908 708 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 RN7SL787P-201ENST00000613000 284 ntBASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC65Q8IXS2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 RNU6-249P-201ENST00000363016 102 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 Z93019.1-201ENST00000416450 973 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 RPS27AP6-201ENST00000427962 448 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 RPL12P17-201ENST00000432393 498 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AL161636.2-201ENST00000445179 927 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 UBE2V2P4-201ENST00000447495 259 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 YWHAEP1-201ENST00000453697 763 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 PPIAP19-201ENST00000486414 492 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 SEPT10P1-201ENST00000517342 1162 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 TMEM97P2-201ENST00000517841 403 ntBASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC65Q8IXS2 AC015720.2-201ENST00000567709 334 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms