Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 OTX2P1-201ENST00000450956 354 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX6-1P78426 RN7SL39P-201ENST00000462264 297 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX6-1P78426 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AC074087.1-201ENST00000512059 724 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AC073581.1-201ENST00000519036 575 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AC023050.2-201ENST00000544968 387 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AC092375.1-201ENST00000550410 637 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX6-1P78426 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AP003115.1-201ENST00000569849 463 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AL589765.6-201ENST00000601909 549 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AL138895.2-201ENST00000603019 178 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AL121895.2-201ENST00000619558 447 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX6-1P78426 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 AC004836.1-201ENST00000623032 634 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC012254.5-201ENST00000623573 478 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC021106.3-201ENST00000623925 531 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX6-1P78426 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NKX6-1P78426 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX6-1P78426 AP002512.4-202ENST00000641599 4530 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 AC007996.1-201ENST00000620414 2821 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX6-1P78426 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX6-1P78426 AL121839.2-201ENST00000565058 6943 ntBASIC5.74□□□□□ -1.49
NKX6-1P78426 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NKX6-1P78426 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 AL354854.1-201ENST00000455940 1363 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NKX6-1P78426 RNU4-92P-201ENST00000363783 136 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 RN7SKP78-201ENST00000364711 318 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NKX6-1P78426 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 YWHAZP6-201ENST00000399764 738 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NKX6-1P78426 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX6-1P78426 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC108479.1-201ENST00000431142 427 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 RPS6P15-201ENST00000431996 751 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX6-1P78426 CYCSP11-201ENST00000436426 315 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 RPL7P29-201ENST00000437151 728 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 GAPDHP33-201ENST00000443168 1013 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 Z83838.1-202ENST00000456225 839 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX6-1P78426 CDC42P1-201ENST00000456658 548 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 RPS27AP2-201ENST00000457576 465 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 AC005410.1-202ENST00000460347 485 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX6-1P78426 HPRT1P2-201ENST00000505250 544 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.73□□□□□ -1.49
NKX6-1P78426 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC083923.1-201ENST00000523708 376 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 AC135983.3-201ENST00000528049 1226 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC061975.8-201ENST00000587058 721 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX6-1P78426 AC114477.1-201ENST00000605097 605 ntBASIC5.73□□□□□ -1.49
NKX6-1P78426 AC090525.3-201ENST00000605601 189 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms