Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
VSX2P58304 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.27□□□□□ -1.57
VSX2P58304 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.27□□□□□ -1.57
VSX2P58304 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.27□□□□□ -1.57
VSX2P58304 AC122688.1-201ENST00000541494 223 ntBASIC5.27□□□□□ -1.57
VSX2P58304 AC084824.2-201ENST00000548906 345 ntBASIC5.27□□□□□ -1.57
VSX2P58304 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.27□□□□□ -1.57
VSX2P58304 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.27□□□□□ -1.57
VSX2P58304 AC007225.2-201ENST00000562529 256 ntBASIC5.27□□□□□ -1.57
VSX2P58304 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.27□□□□□ -1.57
VSX2P58304 AP005403.1-201ENST00000579720 229 ntBASIC5.27□□□□□ -1.57
VSX2P58304 SUGT1P3-202ENST00000604259 383 ntBASIC5.27□□□□□ -1.57
VSX2P58304 AP000864.1-201ENST00000609424 650 ntBASIC5.27□□□□□ -1.57
VSX2P58304 BX323046.1-201ENST00000610145 535 ntBASIC5.27□□□□□ -1.57
VSX2P58304 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.27□□□□□ -1.57
VSX2P58304 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VSX2P58304 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
VSX2P58304 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VSX2P58304 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VSX2P58304 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VSX2P58304 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.27□□□□□ -1.57
VSX2P58304 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VSX2P58304 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.26□□□□□ -1.57
VSX2P58304 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
VSX2P58304 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 NPM1P4-201ENST00000414095 812 ntBASIC5.26□□□□□ -1.57
VSX2P58304 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.26□□□□□ -1.57
VSX2P58304 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.26□□□□□ -1.57
VSX2P58304 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.26□□□□□ -1.57
VSX2P58304 SPRYD7P1-201ENST00000443861 570 ntBASIC5.26□□□□□ -1.57
VSX2P58304 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.26□□□□□ -1.57
VSX2P58304 RPS26P24-201ENST00000497656 331 ntBASIC5.26□□□□□ -1.57
VSX2P58304 RPS17P5-201ENST00000498293 408 ntBASIC5.26□□□□□ -1.57
VSX2P58304 BX510359.5-201ENST00000515651 304 ntBASIC5.26□□□□□ -1.57
VSX2P58304 IGKV2-18-201ENST00000522607 343 ntBASIC5.26□□□□□ -1.57
VSX2P58304 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.26□□□□□ -1.57
VSX2P58304 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.26□□□□□ -1.57
VSX2P58304 AC027026.1-201ENST00000532323 742 ntBASIC5.26□□□□□ -1.57
VSX2P58304 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.26□□□□□ -1.57
VSX2P58304 AC078878.1-201ENST00000539832 958 ntBASIC5.26□□□□□ -1.57
VSX2P58304 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.26□□□□□ -1.57
VSX2P58304 AC007448.1-201ENST00000582714 234 ntBASIC5.26□□□□□ -1.57
VSX2P58304 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.26□□□□□ -1.57
VSX2P58304 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.26□□□□□ -1.57
VSX2P58304 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.26□□□□□ -1.57
VSX2P58304 AL034374.2-201ENST00000605281 548 ntBASIC5.26□□□□□ -1.57
VSX2P58304 AL359513.1-201ENST00000614364 557 ntBASIC5.26□□□□□ -1.57
VSX2P58304 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 MTCO1P7-201ENST00000419523 1542 ntBASIC5.26□□□□□ -1.57
VSX2P58304 AC027279.1-201ENST00000568885 4284 ntBASIC5.26□□□□□ -1.57
VSX2P58304 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
VSX2P58304 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VSX2P58304 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.26□□□□□ -1.57
VSX2P58304 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VSX2P58304 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
VSX2P58304 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VSX2P58304 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VSX2P58304 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VSX2P58304 RARSP1-201ENST00000542842 1418 ntBASIC5.25□□□□□ -1.57
VSX2P58304 MAPK10-328ENST00000641553 4009 ntBASIC5.25□□□□□ -1.57
VSX2P58304 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.25□□□□□ -1.57
VSX2P58304 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VSX2P58304 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.25□□□□□ -1.57
VSX2P58304 OR9K1P-202ENST00000641111 3217 ntBASIC5.25□□□□□ -1.57
VSX2P58304 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VSX2P58304 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VSX2P58304 RN7SKP162-201ENST00000363605 345 ntBASIC5.25□□□□□ -1.57
VSX2P58304 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VSX2P58304 SNORA16A-201ENST00000384342 137 ntBASIC5.25□□□□□ -1.57
VSX2P58304 RNU1-77P-201ENST00000390868 162 ntBASIC5.25□□□□□ -1.57
VSX2P58304 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.25□□□□□ -1.57
VSX2P58304 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.25□□□□□ -1.57
VSX2P58304 Z68694.1-201ENST00000413929 841 ntBASIC5.25□□□□□ -1.57
VSX2P58304 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VSX2P58304 RPL7P56-201ENST00000429441 717 ntBASIC5.25□□□□□ -1.57
VSX2P58304 AC099670.2-201ENST00000435130 321 ntBASIC5.25□□□□□ -1.57
VSX2P58304 MTND2P40-201ENST00000436718 841 ntBASIC5.25□□□□□ -1.57
VSX2P58304 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.25□□□□□ -1.57
VSX2P58304 AC073072.2-201ENST00000447425 348 ntBASIC5.25□□□□□ -1.57
VSX2P58304 IGBP1P3-201ENST00000447449 1000 ntBASIC5.25□□□□□ -1.57
VSX2P58304 SNORD125-201ENST00000459538 96 ntBASIC5.25□□□□□ -1.57
VSX2P58304 NPM1P28-201ENST00000492269 840 ntBASIC5.25□□□□□ -1.57
VSX2P58304 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.25□□□□□ -1.57
VSX2P58304 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.25□□□□□ -1.57
VSX2P58304 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VSX2P58304 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VSX2P58304 MIR4489-201ENST00000578869 62 ntBASIC5.25□□□□□ -1.57
VSX2P58304 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.25□□□□□ -1.57
VSX2P58304 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.25□□□□□ -1.57
VSX2P58304 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms