Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AP001267.4-201ENST00000602598 545 ntBASIC4.99□□□□□ -1.61
CLDN18P56856 SUGT1P3-202ENST00000604259 383 ntBASIC4.99□□□□□ -1.61
CLDN18P56856 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN18P56856 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN18P56856 AL359513.1-201ENST00000614364 557 ntBASIC4.99□□□□□ -1.61
CLDN18P56856 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN18P56856 RNA5SP439-201ENST00000617595 124 ntBASIC4.99□□□□□ -1.61
CLDN18P56856 MIR6826-201ENST00000617808 98 ntBASIC4.99□□□□□ -1.61
CLDN18P56856 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN18P56856 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN18P56856 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN18P56856 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN18P56856 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN18P56856 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN18P56856 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CLDN18P56856 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CLDN18P56856 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN18P56856 MT-RNR2-201ENST00000387347 1559 ntBASIC4.99□□□□□ -1.61
CLDN18P56856 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN18P56856 CASC19-260ENST00000641828 2001 ntBASIC4.99□□□□□ -1.61
CLDN18P56856 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
CLDN18P56856 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
CLDN18P56856 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CLDN18P56856 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN18P56856 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN18P56856 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CLDN18P56856 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CLDN18P56856 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLDN18P56856 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLDN18P56856 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLDN18P56856 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN18P56856 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN18P56856 PTP4A1P1-201ENST00000420539 515 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN18P56856 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN18P56856 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN18P56856 SNRPFP2-201ENST00000440710 251 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN18P56856 AC092106.1-201ENST00000444291 373 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 RN7SL51P-201ENST00000468230 285 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 AC098583.1-201ENST00000480875 255 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 ST13P12-201ENST00000508958 1094 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 BX510359.5-201ENST00000515651 304 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN18P56856 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN18P56856 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 AL358913.1-201ENST00000554342 121 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN18P56856 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN18P56856 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN18P56856 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
CLDN18P56856 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN18P56856 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 AL359955.1-201ENST00000455242 3275 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 AC239868.2-201ENST00000564237 4527 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 HSPD1P7-201ENST00000447985 1686 ntBASIC4.98□□□□□ -1.61
CLDN18P56856 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN18P56856 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN18P56856 KYNUP3-201ENST00000574386 1341 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN18P56856 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN18P56856 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 AP005432.1-201ENST00000580891 3485 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
CLDN18P56856 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 AC068870.1-201ENST00000563737 2455 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CLDN18P56856 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 RNU6-249P-201ENST00000363016 102 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 EI24P3-201ENST00000399046 1062 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN18P56856 RN7SKP59-201ENST00000410520 314 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 MTND4LP21-201ENST00000415303 295 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 CFL1P1-202ENST00000432948 411 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN18P56856 AC011225.1-201ENST00000457751 369 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.97□□□□□ -1.61
CLDN18P56856 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN18P56856 AC016687.1-201ENST00000482574 353 ntBASIC4.97□□□□□ -1.61
CLDN18P56856 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN18P56856 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms