Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SUMO3P55854 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SUMO3P55854 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.69□□□□□ -1.5
SUMO3P55854 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
SUMO3P55854 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SUMO3P55854 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SUMO3P55854 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SUMO3P55854 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SUMO3P55854 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SUMO3P55854 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SUMO3P55854 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
SUMO3P55854 AC034229.2-201ENST00000566945 2508 ntBASIC5.69□□□□□ -1.5
SUMO3P55854 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.69□□□□□ -1.5
SUMO3P55854 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.69□□□□□ -1.5
SUMO3P55854 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.69□□□□□ -1.5
SUMO3P55854 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.68□□□□□ -1.5
SUMO3P55854 AL359091.1-201ENST00000449048 1734 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
SUMO3P55854 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SUMO3P55854 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SUMO3P55854 ENSAP3-201ENST00000312710 333 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SUMO3P55854 RNU6-543P-201ENST00000362576 108 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 RNU1-49P-201ENST00000363468 159 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.68□□□□□ -1.5
SUMO3P55854 RNU6-549P-201ENST00000384433 107 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 MIR188-201ENST00000385034 86 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 TAS2R15P-201ENST00000390674 928 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SUMO3P55854 RN7SKP97-201ENST00000410966 333 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AL445213.1-201ENST00000412589 747 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 RPS7P9-201ENST00000414704 586 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 RPS17P17-201ENST00000419392 409 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AC009506.2-201ENST00000420635 840 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 RPL7AP51-201ENST00000422016 760 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 VN1R20P-201ENST00000425215 966 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 RPS7P14-201ENST00000426405 583 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.68□□□□□ -1.5
SUMO3P55854 CR769776.1-201ENST00000441254 787 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AC097359.1-201ENST00000447946 463 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 MTND1P31-201ENST00000449206 961 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 HIGD1AP16-201ENST00000450986 258 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AC244505.3-201ENST00000454598 187 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.68□□□□□ -1.5
SUMO3P55854 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.68□□□□□ -1.5
SUMO3P55854 AC096741.1-201ENST00000472250 846 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 RN7SL836P-201ENST00000476140 296 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.68□□□□□ -1.5
SUMO3P55854 RPL9P15-201ENST00000491096 532 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 RN7SL362P-201ENST00000494228 267 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 MTND6P8-201ENST00000503471 522 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AC111193.1-201ENST00000504097 155 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 SNX18P24-201ENST00000505249 671 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.68□□□□□ -1.5
SUMO3P55854 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.68□□□□□ -1.5
SUMO3P55854 AC090958.1-201ENST00000511122 351 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AC112673.1-201ENST00000513168 575 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 MTND2P38-201ENST00000522536 667 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.68□□□□□ -1.5
SUMO3P55854 AP003033.2-201ENST00000528901 805 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.68□□□□□ -1.5
SUMO3P55854 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 AC027229.1-201ENST00000583887 253 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 NPIPB1P-202ENST00000588786 828 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AP001823.1-201ENST00000604056 1003 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 WBP1LP12-201ENST00000604449 331 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AC002487.1-201ENST00000604565 994 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AC079395.3-201ENST00000615161 484 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 Z99129.2-201ENST00000619967 314 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 AC003992.1-201ENST00000635364 557 ntBASIC5.68□□□□□ -1.5
SUMO3P55854 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.68□□□□□ -1.5
SUMO3P55854 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.68□□□□□ -1.5
SUMO3P55854 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SUMO3P55854 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.67□□□□□ -1.5
SUMO3P55854 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SUMO3P55854 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms