Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RAB5AP20339 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RAB5AP20339 AC093775.1-201ENST00000624154 1868 ntBASIC4.22□□□□□ -1.73
RAB5AP20339 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RAB5AP20339 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.21□□□□□ -1.73
RAB5AP20339 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.21□□□□□ -1.73
RAB5AP20339 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.21□□□□□ -1.73
RAB5AP20339 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB5AP20339 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RAB5AP20339 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RAB5AP20339 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RAB5AP20339 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RAB5AP20339 RNA5SP28-201ENST00000363841 119 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB5AP20339 SNORA11D-201ENST00000408548 128 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 SNORA11E-201ENST00000408778 128 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 RNA5SP146-201ENST00000410743 123 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 AC024937.2-201ENST00000411669 1242 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.21□□□□□ -1.74
RAB5AP20339 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.21□□□□□ -1.74
RAB5AP20339 RPL12P12-201ENST00000424633 501 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 OR52S1P-201ENST00000427016 937 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC4.21□□□□□ -1.74
RAB5AP20339 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.21□□□□□ -1.74
RAB5AP20339 CR391992.1-201ENST00000438601 394 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 AC023141.8-201ENST00000442554 208 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 RPS7P3-201ENST00000443360 580 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 RN7SL413P-201ENST00000482700 297 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 PSMA2P2-201ENST00000504319 686 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 AC018645.1-201ENST00000505003 109 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 OR4D12P-201ENST00000509361 911 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.21□□□□□ -1.74
RAB5AP20339 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC4.21□□□□□ -1.74
RAB5AP20339 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.21□□□□□ -1.74
RAB5AP20339 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.21□□□□□ -1.74
RAB5AP20339 PMS2P3-207ENST00000529061 717 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 AP006437.1-202ENST00000530327 933 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB5AP20339 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.21□□□□□ -1.74
RAB5AP20339 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB5AP20339 OR1E3-201ENST00000575608 948 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.21□□□□□ -1.74
RAB5AP20339 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.21□□□□□ -1.74
RAB5AP20339 AL008729.2-201ENST00000606393 473 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.21□□□□□ -1.74
RAB5AP20339 AC096861.1-201ENST00000616652 240 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
RAB5AP20339 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB5AP20339 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.21□□□□□ -1.74
RAB5AP20339 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.21□□□□□ -1.74
RAB5AP20339 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RAB5AP20339 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB5AP20339 LINC01613-201ENST00000561476 2780 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
RAB5AP20339 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
RAB5AP20339 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
RAB5AP20339 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB5AP20339 AL133268.1-201ENST00000405676 1401 ntBASIC4.21□□□□□ -1.74
RAB5AP20339 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.21□□□□□ -1.74
RAB5AP20339 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RAB5AP20339 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB5AP20339 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RAB5AP20339 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
RAB5AP20339 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB5AP20339 NXF4-202ENST00000416098 1465 ntBASIC4.2□□□□□ -1.74
RAB5AP20339 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.2□□□□□ -1.74
RAB5AP20339 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB5AP20339 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RAB5AP20339 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB5AP20339 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB5AP20339 RNA5SP105-201ENST00000391123 113 ntBASIC4.2□□□□□ -1.74
RAB5AP20339 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RAB5AP20339 AL121834.1-202ENST00000404494 277 ntBASIC4.2□□□□□ -1.74
RAB5AP20339 AL117344.1-201ENST00000407196 616 ntBASIC4.2□□□□□ -1.74
RAB5AP20339 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.2□□□□□ -1.74
RAB5AP20339 RPL18AP14-201ENST00000417685 526 ntBASIC4.2□□□□□ -1.74
RAB5AP20339 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.2□□□□□ -1.74
RAB5AP20339 AL672212.1-201ENST00000422246 400 ntBASIC4.2□□□□□ -1.74
RAB5AP20339 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB5AP20339 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB5AP20339 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB5AP20339 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RAB5AP20339 GTF3AP6-201ENST00000432585 986 ntBASIC4.2□□□□□ -1.74
RAB5AP20339 AP000936.3-201ENST00000438127 255 ntBASIC4.2□□□□□ -1.74
RAB5AP20339 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.2□□□□□ -1.74
RAB5AP20339 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.2□□□□□ -1.74
RAB5AP20339 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RAB5AP20339 HIGD1AP16-201ENST00000450986 258 ntBASIC4.2□□□□□ -1.74
RAB5AP20339 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms