Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DPA1P20036 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 SAMM50P1-201ENST00000455403 1399 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 LINC01963-201ENST00000562038 3148 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 SMG1P7-201ENST00000565246 2704 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 RNA5SP326-201ENST00000363209 110 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 RNA5SP394-201ENST00000364216 119 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 DSTNP5-201ENST00000427921 523 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 LRRC37A14P-201ENST00000452297 462 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 C1DP3-201ENST00000455013 423 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC091917.2-201ENST00000505002 744 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 RNU6-319P-201ENST00000516025 108 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 IGLV3-24-201ENST00000517477 197 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AP005431.1-201ENST00000618479 319 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC026124.2-201ENST00000621847 656 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 OR13C1P-202ENST00000641378 2919 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC123769.1-201ENST00000530992 3192 ntBASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-DPA1P20036 AC114774.1-201ENST00000507410 1770 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 RBPJP2-201ENST00000618187 1444 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 RNA5SP131-201ENST00000365452 119 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AL031985.1-201ENST00000392713 418 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 HMGB3P7-201ENST00000400214 611 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 RMRPP5-201ENST00000411156 267 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AC093155.2-201ENST00000420734 937 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AL596266.1-201ENST00000448132 400 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 RPS23P9-201ENST00000448848 438 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 RPL31P15-201ENST00000449770 338 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 RPL31P53-201ENST00000457065 348 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 UBFD1P1-201ENST00000473259 814 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AC111000.6-201ENST00000514471 709 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 RN7SKP253-201ENST00000516424 309 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 CYCSP22-201ENST00000517555 339 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AC122688.1-201ENST00000541494 223 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 NPM1P45-201ENST00000583151 559 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 H3F3BP2-201ENST00000583907 357 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AP001542.1-201ENST00000591314 200 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AC009237.12-201ENST00000604755 742 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 MIR193BHG-214ENST00000641765 509 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 AC025470.1-201ENST00000510053 2032 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.67□□□□□ -1.5
HLA-DPA1P20036 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-DPA1P20036 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms