Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ATF4P18848 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 AC136618.2-201ENST00000575091 400 ntBASIC6.2□□□□□ -1.42
ATF4P18848 RN7SL49P-201ENST00000581392 298 ntBASIC6.2□□□□□ -1.42
ATF4P18848 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 AC011444.4-201ENST00000586415 418 ntBASIC6.2□□□□□ -1.42
ATF4P18848 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC6.2□□□□□ -1.42
ATF4P18848 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 AC104785.1-201ENST00000603220 588 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AC018737.1-201ENST00000603900 204 ntBASIC6.2□□□□□ -1.42
ATF4P18848 OR1X1P-201ENST00000606159 931 ntBASIC6.2□□□□□ -1.42
ATF4P18848 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC6.2□□□□□ -1.42
ATF4P18848 AL031658.2-201ENST00000616850 651 ntBASIC6.2□□□□□ -1.42
ATF4P18848 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AL356095.2-201ENST00000624025 457 ntBASIC6.2□□□□□ -1.42
ATF4P18848 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.2□□□□□ -1.42
ATF4P18848 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 AC107081.3-201ENST00000612715 2034 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 MAPK10-344ENST00000641718 3746 ntBASIC6.2□□□□□ -1.42
ATF4P18848 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
ATF4P18848 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF4P18848 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC6.19□□□□□ -1.42
ATF4P18848 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC6.19□□□□□ -1.42
ATF4P18848 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
ATF4P18848 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF4P18848 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ATF4P18848 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC6.19□□□□□ -1.42
ATF4P18848 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 RNU1-47P-201ENST00000362966 163 ntBASIC6.19□□□□□ -1.42
ATF4P18848 Y_RNA.359-201ENST00000365498 102 ntBASIC6.19□□□□□ -1.42
ATF4P18848 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 U3.23-201ENST00000391132 200 ntBASIC6.19□□□□□ -1.42
ATF4P18848 SNRPEP2-201ENST00000397592 279 ntBASIC6.19□□□□□ -1.42
ATF4P18848 RPS7P13-201ENST00000413955 498 ntBASIC6.19□□□□□ -1.42
ATF4P18848 ELOCP17-201ENST00000414751 326 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF4P18848 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF4P18848 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF4P18848 AC008155.1-201ENST00000421078 329 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AL022100.1-202ENST00000421214 548 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC6.19□□□□□ -1.42
ATF4P18848 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 AL512649.1-201ENST00000428997 581 ntBASIC6.19□□□□□ -1.42
ATF4P18848 RPL12P4-201ENST00000432629 497 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AC007683.1-201ENST00000432746 591 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AL606752.1-201ENST00000435442 666 ntBASIC6.19□□□□□ -1.42
ATF4P18848 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.19□□□□□ -1.42
ATF4P18848 H3F3BP1-201ENST00000440551 403 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ATF4P18848 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 AKR1D1P1-201ENST00000457236 936 ntBASIC6.19□□□□□ -1.42
ATF4P18848 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 RPL12P32-201ENST00000484010 494 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AC107956.2-201ENST00000496042 454 ntBASIC6.19□□□□□ -1.42
ATF4P18848 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF4P18848 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.19□□□□□ -1.42
ATF4P18848 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 MTND5P4-201ENST00000514978 288 ntBASIC6.19□□□□□ -1.42
ATF4P18848 GAPDHP62-201ENST00000515313 990 ntBASIC6.19□□□□□ -1.42
ATF4P18848 MTND1P5-201ENST00000517906 940 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 PMS2P3-207ENST00000529061 717 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.19□□□□□ -1.42
ATF4P18848 AC009997.1-201ENST00000557862 129 ntBASIC6.19□□□□□ -1.42
ATF4P18848 AC104046.1-201ENST00000559487 406 ntBASIC6.19□□□□□ -1.42
ATF4P18848 WWOX-AS1-201ENST00000567099 443 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms