Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RN7SKP122-201ENST00000515923 296 ntBASIC8.96□□□□□ -0.97
CFTRP13569 AC233699.1-201ENST00000569955 1168 ntBASIC8.96□□□□□ -0.97
CFTRP13569 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC8.96□□□□□ -0.97
CFTRP13569 AP000919.1-201ENST00000582850 985 ntBASIC8.96□□□□□ -0.97
CFTRP13569 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC8.96□□□□□ -0.97
CFTRP13569 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC8.96□□□□□ -0.97
CFTRP13569 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC8.96□□□□□ -0.97
CFTRP13569 AC100757.1-201ENST00000616872 1835 ntBASIC8.96□□□□□ -0.97
CFTRP13569 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CFTRP13569 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.98
CFTRP13569 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CFTRP13569 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.96□□□□□ -0.98
CFTRP13569 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
CFTRP13569 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CFTRP13569 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
CFTRP13569 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CFTRP13569 FHIT-201ENST00000341848 174 ntTSL 3 BASIC8.96□□□□□ -0.98
CFTRP13569 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC8.96□□□□□ -0.98
CFTRP13569 OR7E125P-201ENST00000443450 846 ntBASIC8.96□□□□□ -0.98
CFTRP13569 AC012512.1-201ENST00000446594 718 ntBASIC8.96□□□□□ -0.98
CFTRP13569 AC091153.1-201ENST00000466297 402 ntBASIC8.96□□□□□ -0.98
CFTRP13569 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.96□□□□□ -0.98
CFTRP13569 GTF2IP11-201ENST00000526931 420 ntBASIC8.96□□□□□ -0.98
CFTRP13569 TOMM20P2-201ENST00000540082 421 ntBASIC8.96□□□□□ -0.98
CFTRP13569 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.96□□□□□ -0.98
CFTRP13569 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CFTRP13569 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.96□□□□□ -0.98
CFTRP13569 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC8.96□□□□□ -0.98
CFTRP13569 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CFTRP13569 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC8.95□□□□□ -0.98
CFTRP13569 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.95□□□□□ -0.98
CFTRP13569 HSPD1P8-201ENST00000400121 1658 ntBASIC8.95□□□□□ -0.98
CFTRP13569 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
CFTRP13569 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
CFTRP13569 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC8.95□□□□□ -0.98
CFTRP13569 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.95□□□□□ -0.98
CFTRP13569 HSPA8P15-201ENST00000401676 786 ntBASIC8.95□□□□□ -0.98
CFTRP13569 CHIAP3-201ENST00000423668 1133 ntBASIC8.95□□□□□ -0.98
CFTRP13569 AC012519.1-201ENST00000424588 610 ntBASIC8.95□□□□□ -0.98
CFTRP13569 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.95□□□□□ -0.98
CFTRP13569 OR4A43P-201ENST00000532938 908 ntBASIC8.95□□□□□ -0.98
CFTRP13569 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC8.95□□□□□ -0.98
CFTRP13569 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
CFTRP13569 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.95□□□□□ -0.98
CFTRP13569 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.95□□□□□ -0.98
CFTRP13569 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.94□□□□□ -0.98
CFTRP13569 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
CFTRP13569 AC144833.1-201ENST00000567953 4089 ntBASIC8.94□□□□□ -0.98
CFTRP13569 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC8.94□□□□□ -0.98
CFTRP13569 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CFTRP13569 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CFTRP13569 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CFTRP13569 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.94□□□□□ -0.98
CFTRP13569 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CFTRP13569 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
CFTRP13569 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CFTRP13569 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.94□□□□□ -0.98
CFTRP13569 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CFTRP13569 RNA5SP479-201ENST00000364858 117 ntBASIC8.94□□□□□ -0.98
CFTRP13569 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
CFTRP13569 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.94□□□□□ -0.98
CFTRP13569 LINC02210-201ENST00000444561 288 ntBASIC8.94□□□□□ -0.98
CFTRP13569 AL354714.3-201ENST00000447284 493 ntBASIC8.94□□□□□ -0.98
CFTRP13569 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.94□□□□□ -0.98
CFTRP13569 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.94□□□□□ -0.98
CFTRP13569 RGS5-219ENST00000528019 512 ntTSL 4 BASIC8.94□□□□□ -0.98
CFTRP13569 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.94□□□□□ -0.98
CFTRP13569 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC8.94□□□□□ -0.98
CFTRP13569 RPL26P30-202ENST00000602923 645 ntBASIC8.94□□□□□ -0.98
CFTRP13569 NEK3-211ENST00000629912 141 ntTSL 5 BASIC8.94□□□□□ -0.98
CFTRP13569 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CFTRP13569 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
CFTRP13569 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CFTRP13569 AC063976.2-201ENST00000425667 3556 ntBASIC8.93□□□□□ -0.98
CFTRP13569 AC140479.2-201ENST00000421567 3130 ntBASIC8.93□□□□□ -0.98
CFTRP13569 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
CFTRP13569 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CFTRP13569 AL359715.3-201ENST00000569267 2123 ntBASIC8.93□□□□□ -0.98
CFTRP13569 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CFTRP13569 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CFTRP13569 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CFTRP13569 RNA5SP191-201ENST00000362585 102 ntBASIC8.93□□□□□ -0.98
CFTRP13569 RPL23AP17-201ENST00000401064 499 ntBASIC8.93□□□□□ -0.98
CFTRP13569 GTF2IP2-201ENST00000424290 697 ntBASIC8.93□□□□□ -0.98
CFTRP13569 BX323845.1-201ENST00000432417 179 ntBASIC8.93□□□□□ -0.98
CFTRP13569 AC111000.3-201ENST00000508057 576 ntBASIC8.93□□□□□ -0.98
CFTRP13569 OR4A17P-201ENST00000526032 904 ntBASIC8.93□□□□□ -0.98
CFTRP13569 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.93□□□□□ -0.98
CFTRP13569 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC8.93□□□□□ -0.98
CFTRP13569 GMFG-202ENST00000594700 397 ntTSL 2 BASIC8.93□□□□□ -0.98
CFTRP13569 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
CFTRP13569 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC8.93□□□□□ -0.98
CFTRP13569 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
CFTRP13569 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
CFTRP13569 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CFTRP13569 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.93□□□□□ -0.98
CFTRP13569 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC8.93□□□□□ -0.98
CFTRP13569 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
CFTRP13569 AC011933.2-201ENST00000578539 2790 ntBASIC8.92□□□□□ -0.98
CFTRP13569 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms