Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
TMEM88BA6NKF7 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC104964.2-201ENST00000562242 4641 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC090771.1-201ENST00000585803 1618 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 RNA5SP80-201ENST00000410475 111 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AL929472.1-201ENST00000417484 429 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 GAPDHP51-201ENST00000426454 1000 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 MTND1P30-201ENST00000441241 901 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 BX248409.1-201ENST00000455497 255 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 H3F3AP3-201ENST00000497682 407 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC091965.2-201ENST00000512324 613 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC106038.2-201ENST00000520706 568 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 IGJP1-201ENST00000522682 475 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AL133399.1-201ENST00000527476 298 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 OR9L1P-201ENST00000529493 933 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 MIR3611-201ENST00000584484 83 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AP003465.2-201ENST00000602571 373 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC004987.4-201ENST00000603383 338 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AL080312.2-201ENST00000613001 630 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC023158.2-201ENST00000614876 543 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC015540.1-201ENST00000615828 501 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AL136981.2-201ENST00000617319 734 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC009878.1-201ENST00000621819 340 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC116618.1-201ENST00000634617 774 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 THAP12P7-201ENST00000520248 2290 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AC027575.3-201ENST00000583058 2747 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 CCT8P1-201ENST00000413611 1657 ntBASIC7.83□□□□□ -1.16
TMEM88BA6NKF7 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 SNORA74A-201ENST00000364089 198 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 OR1L1-202ENST00000373686 1083 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AL391361.1-201ENST00000405580 489 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 CEACAMP8-201ENST00000413902 580 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 GAPDHP49-201ENST00000421421 961 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 PPIAP17-201ENST00000438507 471 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC092641.1-201ENST00000440229 772 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 RBPJP7-201ENST00000442803 1447 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 HMGN1P36-201ENST00000446623 298 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 RBPJP5-201ENST00000449433 1447 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 RNU6-956P-201ENST00000458868 103 ntBASIC7.82□□□□□ -1.16
TMEM88BA6NKF7 AC098847.1-201ENST00000473094 348 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms