Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 CBX3P2-202ENST00000583365 535 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 FO393422.1-201ENST00000603908 708 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 AP001033.2-201ENST00000609701 1003 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 AL691477.1-201ENST00000624398 162 ntBASIC8.18□□□□□ -1.1
USP35Q9P2H5 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC8.18□□□□□ -1.1
USP35Q9P2H5 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USP35Q9P2H5 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USP35Q9P2H5 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USP35Q9P2H5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 RNA5SP443-201ENST00000363083 132 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USP35Q9P2H5 Y_RNA.625-201ENST00000411256 107 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 RPS17P17-201ENST00000419392 409 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 AC002504.1-201ENST00000438281 691 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 AC023512.1-201ENST00000444513 499 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 AL122020.1-201ENST00000472287 459 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 AC109481.1-201ENST00000509173 282 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 AC091078.2-201ENST00000557145 559 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 MIR4505-201ENST00000582238 73 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USP35Q9P2H5 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USP35Q9P2H5 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USP35Q9P2H5 AC119674.1-213ENST00000641177 1386 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 AL359715.4-201ENST00000606629 1436 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 TCP1P3-201ENST00000414406 1498 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USP35Q9P2H5 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 AC062022.1-201ENST00000451026 1684 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 AC011416.1-201ENST00000514947 1732 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
USP35Q9P2H5 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USP35Q9P2H5 AC027088.4-201ENST00000611559 1947 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 AL355834.1-201ENST00000556602 3965 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 AL121950.1-201ENST00000624993 2077 ntBASIC8.17□□□□□ -1.1
USP35Q9P2H5 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USP35Q9P2H5 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USP35Q9P2H5 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USP35Q9P2H5 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USP35Q9P2H5 SNORA70-201ENST00000384436 135 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 RPL34P3-201ENST00000421454 338 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 CCNT2P1-201ENST00000423082 1315 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC073909.1-201ENST00000447112 999 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AP000547.1-201ENST00000454360 617 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 RANP2-201ENST00000456833 229 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC108751.3-201ENST00000461814 1020 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 RN7SL269P-201ENST00000467795 305 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC074087.1-201ENST00000512059 724 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USP35Q9P2H5 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC232271.1-201ENST00000602455 2715 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 FAM27E4-201ENST00000605259 342 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC034236.3-201ENST00000605999 461 ntBASIC8.16□□□□□ -1.1
USP35Q9P2H5 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USP35Q9P2H5 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USP35Q9P2H5 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USP35Q9P2H5 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USP35Q9P2H5 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
USP35Q9P2H5 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USP35Q9P2H5 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.15□□□□□ -1.1
USP35Q9P2H5 NCOA4P2-201ENST00000340589 1813 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
USP35Q9P2H5 NLRP3P1-201ENST00000622303 1785 ntBASIC8.15□□□□□ -1.1
USP35Q9P2H5 UGT2B26P-201ENST00000508672 1613 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms