Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC011497.2-201ENST00000600255 639 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC073333.2-201ENST00000603589 769 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AL158042.1-201ENST00000605338 460 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AL121895.2-201ENST00000619558 447 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC021422.1-201ENST00000621212 473 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AL157770.1-201ENST00000623049 439 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC003992.1-201ENST00000635364 557 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 OR7A1P-202ENST00000641542 1158 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AC022325.1-201ENST00000502748 2199 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 NCOA4P2-201ENST00000340589 1813 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AL356473.1-201ENST00000406203 1408 ntBASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP1Q96SZ6 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 OR7E156P-201ENST00000400303 464 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 RN7SKP240-201ENST00000410583 375 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC046176.1-201ENST00000435260 1170 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC023141.3-201ENST00000436698 278 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC110602.1-201ENST00000437414 318 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AL359265.1-201ENST00000440296 795 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 RPL7L1P3-201ENST00000455249 689 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC103563.5-201ENST00000455643 364 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 RN7SL221P-201ENST00000466190 281 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 IGKV3D-25-201ENST00000519599 235 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 RPA2P1-201ENST00000556557 721 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 NPM1P45-201ENST00000583151 559 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC080078.2-201ENST00000603766 501 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC015849.6-201ENST00000605454 474 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AL645933.2-201ENST00000606743 1207 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC141002.1-201ENST00000607025 279 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AL021368.3-201ENST00000607119 578 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC069234.5-201ENST00000611056 416 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC004241.3-201ENST00000611728 517 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AL137067.2-201ENST00000621202 131 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AP003400.2-201ENST00000624036 666 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 MIR1910-201ENST00000636955 80 ntBASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP1Q96SZ6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDK5RAP1Q96SZ6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDK5RAP1Q96SZ6 AP001541.1-201ENST00000623322 1904 ntBASIC6.4□□□□□ -1.39
CDK5RAP1Q96SZ6 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.4□□□□□ -1.39
CDK5RAP1Q96SZ6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CDK5RAP1Q96SZ6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CDK5RAP1Q96SZ6 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
CDK5RAP1Q96SZ6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDK5RAP1Q96SZ6 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CDK5RAP1Q96SZ6 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.4□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AC096921.2-201ENST00000561507 1916 ntBASIC6.39□□□□□ -1.39
CDK5RAP1Q96SZ6 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms