Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 HMGB1P5-201ENST00000255320 642 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 SNORA73B-201ENST00000363217 204 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 RN7SKP250-201ENST00000363924 321 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 SNORA63.7-201ENST00000365579 123 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC087752.1-201ENST00000391360 558 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AL845321.1-201ENST00000444603 348 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 VN1R38P-201ENST00000450265 887 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC099670.1-201ENST00000455141 783 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 RN7SL372P-201ENST00000461982 298 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 PSAT1P4-201ENST00000466500 526 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC016687.1-201ENST00000482574 353 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 RN7SL350P-201ENST00000492591 299 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 CHCHD2P7-201ENST00000508008 452 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC107953.1-201ENST00000522216 297 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 OR8A2P-201ENST00000528631 952 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC087241.2-201ENST00000535801 324 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC126177.6-201ENST00000550420 1009 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 OR4N1P-201ENST00000554847 949 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC068714.1-201ENST00000559623 800 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC055876.1-202ENST00000567053 138 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AL596327.1-201ENST00000603629 213 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 TP53TG1_2.1-201ENST00000611226 182 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC138649.5-201ENST00000637456 137 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 CASC19-212ENST00000641153 1287 ntBASIC8.34□□□□□ -1.07
LRCH3Q96II8 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
LRCH3Q96II8 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRCH3Q96II8 AC013268.3-201ENST00000262716 2324 ntBASIC8.34□□□□□ -1.08
LRCH3Q96II8 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.08
LRCH3Q96II8 AC107982.1-201ENST00000507171 1300 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC024560.2-201ENST00000507981 1497 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 EIF4BP5-201ENST00000567338 1795 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC009135.2-201ENST00000624136 1768 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC005294.1-201ENST00000355509 281 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 LDHAP5-201ENST00000394996 622 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 RPL10P10-201ENST00000403509 664 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 MIR548F4-201ENST00000408515 105 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 RN7SL849P-201ENST00000485236 295 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC108078.3-201ENST00000502633 489 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 UGT2A3P7-201ENST00000510485 734 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 KCTD9P2-201ENST00000512203 1013 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 RNY4P37-201ENST00000516225 96 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 SNX18P27-201ENST00000523611 779 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 OR4C7P-201ENST00000533375 919 ntBASIC8.33□□□□□ -1.08
LRCH3Q96II8 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRCH3Q96II8 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC8.33□□□□□ -1.08
LRCH3Q96II8 AC125494.2-201ENST00000602431 657 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms