Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC099654.8-201ENST00000637757 681 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC007114.2-201ENST00000576014 4281 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC106754.1-201ENST00000562632 1513 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 RNA5SP350-201ENST00000363298 111 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 SNRPEP6-201ENST00000407465 277 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 RPL7L1P9-201ENST00000431298 745 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 RAB28P3-201ENST00000448325 597 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 RPS21P4-201ENST00000487122 248 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 MTCO1P31-201ENST00000506355 492 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 RNU6-1334P-201ENST00000516032 105 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 AP001372.4-201ENST00000524889 472 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 AC068787.1-201ENST00000623908 691 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 TCP1P3-201ENST00000414406 1498 ntBASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SMC1BQ8NDV3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC010132.2-201ENST00000295493 1043 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 RPS3AP25-201ENST00000411660 793 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 OR13Z1P-201ENST00000416141 834 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC005033.1-201ENST00000428904 813 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AL022331.1-201ENST00000429025 477 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 RN7SL817P-201ENST00000480777 288 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC114322.1-201ENST00000506771 926 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC093770.1-201ENST00000511559 571 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 MTCO3P27-201ENST00000514397 196 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 OR7E13P-201ENST00000526052 910 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AP001922.4-201ENST00000526967 290 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC022832.1-201ENST00000530718 645 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC092865.1-201ENST00000544395 1023 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC008147.3-201ENST00000548666 354 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 MIR8084-201ENST00000614105 89 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC131009.3-201ENST00000621809 287 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 AC136428.4-201ENST00000634254 1155 ntBASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SMC1BQ8NDV3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms