Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC007485.2-201ENST00000623493 1667 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AL049737.1-201ENST00000413920 1403 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 OOSP1-201ENST00000398992 1270 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 MTCO1P56-201ENST00000401674 224 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AL451046.1-201ENST00000406097 534 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 RNU2-18P-201ENST00000411224 162 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC246680.2-201ENST00000422106 389 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 MTND4P20-201ENST00000424125 869 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 RPS3AP44-201ENST00000425466 790 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 HMGB1P5-202ENST00000451497 985 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AURKAPS1-201ENST00000451805 1212 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC234781.3-201ENST00000452540 973 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 NPM1P13-201ENST00000452663 865 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 BZW1P1-201ENST00000454901 1240 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 RPL5P13-201ENST00000462840 709 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC113367.2-201ENST00000505749 160 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 GUSBP9-201ENST00000510138 584 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 RNU6-759P-201ENST00000516740 103 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 PDCL2P2-201ENST00000533651 189 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AL391156.1-201ENST00000554965 554 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC012213.3-201ENST00000577199 777 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AL589863.1-201ENST00000595383 631 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AL589765.6-201ENST00000601909 549 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AL122023.1-201ENST00000622847 530 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC091931.1-201ENST00000623488 728 ntBASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TRIM48Q8IWZ4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 NEPNP-201ENST00000404786 1371 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 RNA5SP232-201ENST00000364144 119 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 SETP15-201ENST00000412724 337 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 MRPS21P5-201ENST00000417885 231 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 RAC1P8-201ENST00000427086 527 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 PRELID3BP10-201ENST00000431957 584 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 AL353706.1-201ENST00000436728 494 ntBASIC6.35□□□□□ -1.39
TRIM48Q8IWZ4 COX7BP2-201ENST00000437976 242 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms