Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 ZNF733P-202ENST00000444809 1573 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 SAMMSON-203ENST00000641005 2168 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 TMSB4XP4-201ENST00000323496 618 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 RNA5SP88-201ENST00000365560 109 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 MIR187-201ENST00000385062 109 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC092642.1-201ENST00000392417 425 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 U3.31-201ENST00000408113 216 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 BCRP8-201ENST00000412037 255 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AL136231.1-201ENST00000429407 730 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 SALL1P1-201ENST00000438101 3837 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 EIF5AP4-201ENST00000441206 465 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 MTND1P18-201ENST00000448191 573 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 COX6CP18-201ENST00000448769 222 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC110749.1-201ENST00000462007 357 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 TDGF1P6-201ENST00000463873 448 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC121758.1-202ENST00000556917 658 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 MIR3671-201ENST00000580455 88 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 VN1R79P-201ENST00000593540 513 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AL353726.1-201ENST00000614041 1000 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 MIR665-201ENST00000635949 72 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC233280.20-201ENST00000637412 416 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AL139254.2-202ENST00000641937 1156 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 SF3A3P1-201ENST00000446317 1477 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AL669831.5-218ENST00000591702 1873 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 NAMPTP1-201ENST00000440465 2514 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC006600.2-201ENST00000624834 2506 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 Z99129.4-201ENST00000624649 2435 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC114786.1-201ENST00000512892 1415 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 AC092111.2-201ENST00000611627 1414 ntBASIC7.78□□□□□ -1.16
RNF135Q8IUD6 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.77□□□□□ -1.16
RNF135Q8IUD6 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AL121835.2-201ENST00000624253 3502 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms