Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4DQ86TL0 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.37□□□□□ -1.39
ATG4DQ86TL0 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4DQ86TL0 MARK2P4-201ENST00000503381 2380 ntBASIC6.37□□□□□ -1.39
ATG4DQ86TL0 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4DQ86TL0 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
ATG4DQ86TL0 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
ATG4DQ86TL0 AC092821.2-201ENST00000545710 2042 ntBASIC6.37□□□□□ -1.39
ATG4DQ86TL0 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC023886.2-201ENST00000321285 411 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 RNU6-500P-201ENST00000362349 107 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 RPS7P12-201ENST00000422385 582 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 CHCHD3P1-201ENST00000425516 676 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 FTLP17-201ENST00000432567 525 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC112492.2-201ENST00000432774 1030 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 NDUFA5P4-201ENST00000436704 385 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 UBE2V1P3-201ENST00000439651 417 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 OR51B8P-201ENST00000449892 769 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 NIPA2P5-201ENST00000452282 464 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 RPS20P24-201ENST00000457473 361 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 OR9M1P-201ENST00000459641 921 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC004890.1-201ENST00000461005 181 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC146507.1-201ENST00000468335 354 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC109462.1-201ENST00000491087 368 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC025459.1-201ENST00000504072 156 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 IMPA1P1-201ENST00000510718 842 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC113191.1-201ENST00000517759 403 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AP001803.1-201ENST00000525668 147 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 OR5AZ1P-201ENST00000527448 943 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 NDUFA3P2-201ENST00000531434 232 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AP002004.1-206ENST00000532441 876 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AL352979.3-201ENST00000553515 247 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC121758.1-202ENST00000556917 658 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 MTCO1P40-201ENST00000574371 625 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC087575.1-201ENST00000585087 229 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC092032.1-201ENST00000603090 165 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AL022154.1-201ENST00000604698 785 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AL049634.3-201ENST00000604968 457 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AL078624.2-201ENST00000605063 554 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC135507.2-201ENST00000612443 309 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC087894.3-201ENST00000623682 349 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC005839.1-201ENST00000624148 3213 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 SPATA31C1-201ENST00000420021 3895 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AC013268.3-201ENST00000262716 2324 ntBASIC6.36□□□□□ -1.39
ATG4DQ86TL0 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ATG4DQ86TL0 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms