Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SOX4Q06945 AC011592.1-201ENST00000624647 3634 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SOX4Q06945 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.1□□□□□ -1.27
SOX4Q06945 AC127070.3-201ENST00000503695 3263 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SOX4Q06945 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SOX4Q06945 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 AL672167.1-206ENST00000356293 943 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 RNA5SP512-201ENST00000364550 120 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 RNA5SP77-201ENST00000365394 120 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
SOX4Q06945 RNU6-1200P-201ENST00000384162 107 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 RPL5P20-201ENST00000403848 896 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 RNU2-18P-201ENST00000411224 162 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 RPL24P2-201ENST00000421023 475 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AC005189.1-201ENST00000431286 310 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX4Q06945 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX4Q06945 SNRPEP8-201ENST00000442866 260 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 COX6CP2-201ENST00000444980 225 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.1□□□□□ -1.27
SOX4Q06945 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX4Q06945 RN7SL561P-201ENST00000488553 281 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 FCF1P3-201ENST00000496394 590 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.1□□□□□ -1.27
SOX4Q06945 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX4Q06945 BNIP3P41-201ENST00000503774 571 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX4Q06945 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 RPL37P25-201ENST00000507308 276 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 HMGN1P16-201ENST00000508308 283 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AC116347.2-201ENST00000514912 523 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 MAL2-205ENST00000521048 575 ntTSL 4 BASIC7.1□□□□□ -1.27
SOX4Q06945 AC008429.2-201ENST00000523057 864 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AC118273.2-201ENST00000532092 465 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.1□□□□□ -1.27
SOX4Q06945 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.1□□□□□ -1.27
SOX4Q06945 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.1□□□□□ -1.27
SOX4Q06945 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.1□□□□□ -1.27
SOX4Q06945 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 AC023310.2-201ENST00000553844 547 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 HIGD1AP17-201ENST00000554576 276 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.1□□□□□ -1.27
SOX4Q06945 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.1□□□□□ -1.27
SOX4Q06945 AC116553.2-201ENST00000564203 463 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 ABBA01006766.1-201ENST00000584728 294 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AC004805.3-201ENST00000603178 310 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AC009237.13-201ENST00000603193 276 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AL392112.1-201ENST00000605115 829 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 RNU4-89P-201ENST00000607443 133 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 AC004067.1-201ENST00000608733 700 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 MIR7854-201ENST00000620068 65 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SOX4Q06945 SNX18P10-201ENST00000625014 519 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 BX322650.1-201ENST00000332359 2143 ntBASIC7.1□□□□□ -1.27
SOX4Q06945 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SOX4Q06945 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
SOX4Q06945 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
SOX4Q06945 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX4Q06945 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SOX4Q06945 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.09□□□□□ -1.27
SOX4Q06945 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX4Q06945 AC011379.1-201ENST00000508713 3025 ntBASIC7.09□□□□□ -1.27
SOX4Q06945 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SOX4Q06945 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SOX4Q06945 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SOX4Q06945 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.09□□□□□ -1.27
SOX4Q06945 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.09□□□□□ -1.27
SOX4Q06945 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.09□□□□□ -1.27
SOX4Q06945 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SOX4Q06945 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.09□□□□□ -1.27
SOX4Q06945 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SOX4Q06945 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms