Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.32□□□□□ -1.4
CCNA1P78396 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.31□□□□□ -1.4
CCNA1P78396 AC011504.1-201ENST00000623331 4103 ntBASIC6.31□□□□□ -1.4
CCNA1P78396 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.31□□□□□ -1.4
CCNA1P78396 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.31□□□□□ -1.4
CCNA1P78396 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.31□□□□□ -1.4
CCNA1P78396 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.31□□□□□ -1.4
CCNA1P78396 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.31□□□□□ -1.4
CCNA1P78396 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 RNU1-149P-201ENST00000390870 161 ntBASIC6.31□□□□□ -1.4
CCNA1P78396 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.31□□□□□ -1.4
CCNA1P78396 RNGTTP1-201ENST00000420965 728 ntBASIC6.31□□□□□ -1.4
CCNA1P78396 SRSF1P1-201ENST00000424058 520 ntBASIC6.31□□□□□ -1.4
CCNA1P78396 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.31□□□□□ -1.4
CCNA1P78396 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.31□□□□□ -1.4
CCNA1P78396 AL161722.1-201ENST00000446972 1032 ntBASIC6.31□□□□□ -1.4
CCNA1P78396 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.31□□□□□ -1.4
CCNA1P78396 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.31□□□□□ -1.4
CCNA1P78396 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.31□□□□□ -1.4
CCNA1P78396 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.31□□□□□ -1.4
CCNA1P78396 MTND6P2-201ENST00000512226 524 ntBASIC6.31□□□□□ -1.4
CCNA1P78396 snoU109.5-201ENST00000516231 132 ntBASIC6.31□□□□□ -1.4
CCNA1P78396 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCNA1P78396 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.31□□□□□ -1.4
CCNA1P78396 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.31□□□□□ -1.4
CCNA1P78396 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.31□□□□□ -1.4
CCNA1P78396 RBM22P1-201ENST00000578589 1214 ntBASIC6.31□□□□□ -1.4
CCNA1P78396 AC069307.1-201ENST00000602820 447 ntBASIC6.31□□□□□ -1.4
CCNA1P78396 AC133644.2-201ENST00000608142 540 ntBASIC6.31□□□□□ -1.4
CCNA1P78396 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCNA1P78396 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.31□□□□□ -1.4
CCNA1P78396 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.31□□□□□ -1.4
CCNA1P78396 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.31□□□□□ -1.4
CCNA1P78396 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
CCNA1P78396 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCNA1P78396 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCNA1P78396 ZNF101P1-201ENST00000435701 1720 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.3□□□□□ -1.4
CCNA1P78396 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 SAMMSON-210ENST00000641260 1308 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.3□□□□□ -1.4
CCNA1P78396 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 RN7SKP115-201ENST00000363177 317 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 RNU1-106P-201ENST00000384382 164 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CCNA1P78396 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNA1P78396 AL133388.1-201ENST00000404509 287 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 DUTP5-201ENST00000406790 469 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 U3.36-201ENST00000408418 213 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 GSTM5P1-201ENST00000434751 660 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNA1P78396 AL136455.1-201ENST00000441083 1240 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 AL672138.1-201ENST00000450604 1015 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 RPL35AP28-201ENST00000459730 331 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 ATP5LP5-201ENST00000483050 299 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNA1P78396 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.3□□□□□ -1.4
CCNA1P78396 RNU6-941P-201ENST00000516346 108 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.3□□□□□ -1.4
CCNA1P78396 AC106730.2-201ENST00000566641 540 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 DHFRP1-201ENST00000579682 559 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.3□□□□□ -1.4
CCNA1P78396 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.3□□□□□ -1.4
CCNA1P78396 AC095055.1-201ENST00000603472 1113 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 HIRAP1-201ENST00000605318 787 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 AL133481.2-203ENST00000607558 139 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.3□□□□□ -1.4
CCNA1P78396 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.3□□□□□ -1.4
CCNA1P78396 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.3□□□□□ -1.4
CCNA1P78396 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.3□□□□□ -1.4
CCNA1P78396 AC109583.2-201ENST00000617367 129 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 AP001784.1-201ENST00000624107 428 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 MAPK10-350ENST00000641777 965 ntBASIC6.3□□□□□ -1.4
CCNA1P78396 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.3□□□□□ -1.4
CCNA1P78396 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CCNA1P78396 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCNA1P78396 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms