Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.5□□□□□ -1.53
CDH13P55290 AP005435.3-201ENST00000531260 3198 ntBASIC5.5□□□□□ -1.53
CDH13P55290 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH13P55290 RNA5SP477-201ENST00000362639 119 ntBASIC5.5□□□□□ -1.53
CDH13P55290 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH13P55290 U3.28-201ENST00000391249 210 ntBASIC5.5□□□□□ -1.53
CDH13P55290 RPS6P23-201ENST00000413224 722 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH13P55290 PTP4A1P1-201ENST00000420539 515 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH13P55290 AC007679.3-201ENST00000434035 414 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.5□□□□□ -1.53
CDH13P55290 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH13P55290 LINC02210-201ENST00000444561 288 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH13P55290 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH13P55290 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH13P55290 AC089999.1-201ENST00000460336 374 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AC098583.1-201ENST00000480875 255 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH13P55290 PCNAP1-201ENST00000505363 709 ntBASIC5.5□□□□□ -1.53
CDH13P55290 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.5□□□□□ -1.53
CDH13P55290 OR5H7P-201ENST00000514084 930 ntBASIC5.5□□□□□ -1.53
CDH13P55290 RN7SKP183-201ENST00000517169 324 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH13P55290 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH13P55290 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH13P55290 AC122688.1-201ENST00000541494 223 ntBASIC5.5□□□□□ -1.53
CDH13P55290 HSPE1P2-201ENST00000554777 306 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH13P55290 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH13P55290 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH13P55290 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.5□□□□□ -1.53
CDH13P55290 AC005520.3-201ENST00000602874 370 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH13P55290 AL159169.2-201ENST00000610061 1269 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AL162574.2-201ENST00000614618 657 ntBASIC5.5□□□□□ -1.53
CDH13P55290 AC090607.5-201ENST00000615692 224 ntBASIC5.5□□□□□ -1.53
CDH13P55290 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.5□□□□□ -1.53
CDH13P55290 OR8G7P-201ENST00000616658 848 ntBASIC5.5□□□□□ -1.53
CDH13P55290 WBP1LP8-201ENST00000617401 327 ntBASIC5.5□□□□□ -1.53
CDH13P55290 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH13P55290 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH13P55290 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH13P55290 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH13P55290 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH13P55290 CDC27P2-201ENST00000425026 1922 ntBASIC5.5□□□□□ -1.53
CDH13P55290 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH13P55290 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH13P55290 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CDH13P55290 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH13P55290 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH13P55290 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH13P55290 AL360270.2-201ENST00000562952 5985 ntBASIC5.49□□□□□ -1.53
CDH13P55290 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.49□□□□□ -1.53
CDH13P55290 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH13P55290 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH13P55290 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDH13P55290 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CDH13P55290 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDH13P55290 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CDH13P55290 AL672167.2-201ENST00000377164 879 ntBASIC5.49□□□□□ -1.53
CDH13P55290 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 RNF10P1-201ENST00000418589 369 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AL136231.1-201ENST00000429407 730 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH13P55290 PCBP2P1-201ENST00000437262 977 ntBASIC5.49□□□□□ -1.53
CDH13P55290 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH13P55290 NANOGP9-201ENST00000439890 892 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AL359265.1-201ENST00000440296 795 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH13P55290 BUD31P2-201ENST00000449374 300 ntBASIC5.49□□□□□ -1.53
CDH13P55290 YRDCP3-201ENST00000456507 480 ntBASIC5.49□□□□□ -1.53
CDH13P55290 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 LSM3P4-201ENST00000502948 309 ntBASIC5.49□□□□□ -1.53
CDH13P55290 DUTP7-201ENST00000507982 486 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH13P55290 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH13P55290 AC114781.3-201ENST00000512083 142 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH13P55290 RN7SKP34-201ENST00000516142 244 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AC026688.1-201ENST00000520639 1168 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH13P55290 OR4V1P-201ENST00000525394 1140 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AC027369.2-201ENST00000528030 440 ntBASIC5.49□□□□□ -1.53
CDH13P55290 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH13P55290 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDH13P55290 AC006512.2-201ENST00000543250 486 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH13P55290 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH13P55290 LINC00556-201ENST00000569603 412 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms