Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.71□□□□□ -1.5
NR1H2P55055 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NR1H2P55055 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NR1H2P55055 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.71□□□□□ -1.5
NR1H2P55055 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NR1H2P55055 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NR1H2P55055 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NR1H2P55055 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NR1H2P55055 RN7SKP15-201ENST00000364742 309 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.71□□□□□ -1.5
NR1H2P55055 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.71□□□□□ -1.5
NR1H2P55055 AC092642.1-201ENST00000392417 425 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 RBBP4P5-201ENST00000398583 1266 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 RNU2-17P-201ENST00000410290 190 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 AC079809.1-201ENST00000415468 276 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.71□□□□□ -1.5
NR1H2P55055 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
NR1H2P55055 HMGN1P2-201ENST00000445197 310 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 AC023271.1-201ENST00000445936 1090 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 RN7SL197P-201ENST00000466981 299 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.71□□□□□ -1.5
NR1H2P55055 HMGN1P16-201ENST00000508308 283 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 AC008429.2-201ENST00000523057 864 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 NPM1P35-201ENST00000533043 868 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 AC092451.2-201ENST00000538746 658 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.71□□□□□ -1.5
NR1H2P55055 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.71□□□□□ -1.5
NR1H2P55055 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.71□□□□□ -1.5
NR1H2P55055 AC026956.1-201ENST00000558741 396 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 CD24P2-201ENST00000565486 219 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 AC122134.1-202ENST00000569111 1201 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.71□□□□□ -1.5
NR1H2P55055 AL589765.6-201ENST00000601909 549 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.71□□□□□ -1.5
NR1H2P55055 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.71□□□□□ -1.5
NR1H2P55055 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.71□□□□□ -1.5
NR1H2P55055 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NR1H2P55055 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NR1H2P55055 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.71□□□□□ -1.5
NR1H2P55055 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NR1H2P55055 AC007996.1-201ENST00000620414 2821 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 AC005702.3-201ENST00000585345 1447 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NR1H2P55055 AC020656.2-201ENST00000613291 5309 ntBASIC5.71□□□□□ -1.5
NR1H2P55055 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NR1H2P55055 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NR1H2P55055 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NR1H2P55055 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
NR1H2P55055 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NR1H2P55055 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 NEPNP-201ENST00000404786 1371 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 AL161756.3-201ENST00000641216 2071 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
NR1H2P55055 AC005522.1-201ENST00000395416 346 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.7□□□□□ -1.5
NR1H2P55055 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NR1H2P55055 VN1R20P-201ENST00000425215 966 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NR1H2P55055 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.7□□□□□ -1.5
NR1H2P55055 GAPDHP59-201ENST00000435908 267 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.7□□□□□ -1.5
NR1H2P55055 AC022431.1-201ENST00000450941 438 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 VPS25P1-201ENST00000455691 508 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.7□□□□□ -1.5
NR1H2P55055 PDCL3P4-201ENST00000489621 720 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 RPL19P11-201ENST00000495944 589 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.7□□□□□ -1.5
NR1H2P55055 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.7□□□□□ -1.5
NR1H2P55055 AC138866.2-201ENST00000508650 584 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 SCARNA5-201ENST00000516201 276 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 AC018442.3-201ENST00000523025 183 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 OR56A7P-201ENST00000524865 941 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.7□□□□□ -1.5
NR1H2P55055 RPA2P3-201ENST00000533268 770 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.7□□□□□ -1.5
NR1H2P55055 AC009852.2-201ENST00000567898 485 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 AC002310.3-201ENST00000569728 723 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.7□□□□□ -1.5
NR1H2P55055 MIR4502-201ENST00000580432 81 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 SS18L2P2-201ENST00000583960 235 ntBASIC5.7□□□□□ -1.5
NR1H2P55055 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms