Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 SSR1P1-201ENST00000407630 814 ntBASIC5.43□□□□□ -1.54
HLA-DQB2P05538 OR3A2-201ENST00000408891 1076 ntBASIC5.43□□□□□ -1.54
HLA-DQB2P05538 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 AC090804.1-201ENST00000448870 490 ntBASIC5.43□□□□□ -1.54
HLA-DQB2P05538 RN7SL423P-201ENST00000486202 304 ntBASIC5.43□□□□□ -1.54
HLA-DQB2P05538 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 RPL10P14-201ENST00000565265 298 ntBASIC5.43□□□□□ -1.54
HLA-DQB2P05538 RN7SL290P-201ENST00000578661 300 ntBASIC5.43□□□□□ -1.54
HLA-DQB2P05538 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 AC011445.2-201ENST00000599274 173 ntBASIC5.43□□□□□ -1.54
HLA-DQB2P05538 AC079298.1-201ENST00000625026 1619 ntBASIC5.43□□□□□ -1.54
HLA-DQB2P05538 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DQB2P05538 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 RNA5SP435-201ENST00000364044 108 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 MIR143-201ENST00000385300 106 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AC009804.1-201ENST00000400949 179 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 RN7SKP59-201ENST00000410520 314 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AL133325.1-201ENST00000421090 382 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 RPL7AP49-201ENST00000429522 581 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AC124944.2-201ENST00000429866 1242 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AL591438.1-201ENST00000433508 581 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 SIAH1P1-201ENST00000479411 923 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 RN7SL447P-201ENST00000494711 245 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AC108693.1-201ENST00000496068 432 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 IMPA1P1-201ENST00000510718 842 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 RNU6-941P-201ENST00000516346 108 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AC106730.2-201ENST00000566641 540 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AC136428.4-201ENST00000634254 1155 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AC027279.1-201ENST00000568885 4284 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AP001029.2-203ENST00000589795 4910 ntBASIC5.42□□□□□ -1.54
HLA-DQB2P05538 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DQB2P05538 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 RNU6-316P-201ENST00000391027 107 ntBASIC5.41□□□□□ -1.54
HLA-DQB2P05538 RNA5SP241-201ENST00000391326 114 ntBASIC5.41□□□□□ -1.54
HLA-DQB2P05538 RN7SKP206-201ENST00000410823 293 ntBASIC5.41□□□□□ -1.54
HLA-DQB2P05538 RPL35AP24-201ENST00000413846 330 ntBASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 RPL19P16-201ENST00000433839 588 ntBASIC5.41□□□□□ -1.54
HLA-DQB2P05538 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 RPL15P21-201ENST00000495592 567 ntBASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AC106872.4-201ENST00000510050 523 ntBASIC5.41□□□□□ -1.54
HLA-DQB2P05538 RNA5SP373-201ENST00000517271 95 ntBASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AC092709.1-201ENST00000521355 1045 ntBASIC5.41□□□□□ -1.54
HLA-DQB2P05538 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DQB2P05538 MTCO1P1-201ENST00000624263 1081 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms