Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AL136038.1-201ENST00000497246 351 ntBASIC4.29□□□□□ -1.72
TRGV3P03979 MTND6P2-201ENST00000512226 524 ntBASIC4.29□□□□□ -1.72
TRGV3P03979 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRGV3P03979 IGKV3D-34-201ENST00000522638 302 ntBASIC4.29□□□□□ -1.72
TRGV3P03979 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.29□□□□□ -1.72
TRGV3P03979 OR4A17P-201ENST00000526032 904 ntBASIC4.29□□□□□ -1.72
TRGV3P03979 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.29□□□□□ -1.72
TRGV3P03979 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.29□□□□□ -1.72
TRGV3P03979 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRGV3P03979 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.29□□□□□ -1.72
TRGV3P03979 AC012146.2-201ENST00000576545 416 ntBASIC4.29□□□□□ -1.72
TRGV3P03979 SNORD95-201ENST00000579879 68 ntBASIC4.29□□□□□ -1.72
TRGV3P03979 AL589674.2-201ENST00000604304 337 ntBASIC4.29□□□□□ -1.72
TRGV3P03979 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRGV3P03979 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.29□□□□□ -1.72
TRGV3P03979 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.29□□□□□ -1.72
TRGV3P03979 AL049767.1-202ENST00000637826 242 ntBASIC4.29□□□□□ -1.72
TRGV3P03979 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRGV3P03979 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TRGV3P03979 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.29□□□□□ -1.72
TRGV3P03979 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRGV3P03979 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TRGV3P03979 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRGV3P03979 AC090220.1-201ENST00000593078 1699 ntBASIC4.29□□□□□ -1.72
TRGV3P03979 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.28□□□□□ -1.72
TRGV3P03979 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.28□□□□□ -1.72
TRGV3P03979 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 AL359265.1-201ENST00000440296 795 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 RPS23P9-201ENST00000448848 438 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 AZGP1P2-201ENST00000454506 345 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 AC100832.1-201ENST00000471945 383 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 AC090638.1-201ENST00000498296 909 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.28□□□□□ -1.72
TRGV3P03979 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.28□□□□□ -1.72
TRGV3P03979 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.28□□□□□ -1.72
TRGV3P03979 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.28□□□□□ -1.72
TRGV3P03979 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.28□□□□□ -1.72
TRGV3P03979 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.28□□□□□ -1.72
TRGV3P03979 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.28□□□□□ -1.72
TRGV3P03979 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 AC011445.2-201ENST00000599274 173 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 AL139124.1-201ENST00000609123 421 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 uc_338.7-201ENST00000621834 124 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 MIR8080-201ENST00000622224 89 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.28□□□□□ -1.72
TRGV3P03979 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.28□□□□□ -1.72
TRGV3P03979 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 MIR4302-201ENST00000638058 60 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.28□□□□□ -1.72
TRGV3P03979 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRGV3P03979 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.28□□□□□ -1.72
TRGV3P03979 AC093671.1-201ENST00000624981 2929 ntBASIC4.28□□□□□ -1.72
TRGV3P03979 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.28□□□□□ -1.73
TRGV3P03979 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRGV3P03979 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.27□□□□□ -1.73
TRGV3P03979 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRGV3P03979 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.27□□□□□ -1.73
TRGV3P03979 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
TRGV3P03979 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
TRGV3P03979 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRGV3P03979 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRGV3P03979 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRGV3P03979 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRGV3P03979 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.27□□□□□ -1.73
TRGV3P03979 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
TRGV3P03979 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.27□□□□□ -1.73
TRGV3P03979 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRGV3P03979 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TRGV3P03979 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TRGV3P03979 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRGV3P03979 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRGV3P03979 RN7SKP145-201ENST00000363291 303 ntBASIC4.27□□□□□ -1.73
TRGV3P03979 SNORA70.6-201ENST00000383934 134 ntBASIC4.27□□□□□ -1.73
TRGV3P03979 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRGV3P03979 AL133482.1-201ENST00000415988 498 ntBASIC4.27□□□□□ -1.73
TRGV3P03979 RPS27AP6-201ENST00000427962 448 ntBASIC4.27□□□□□ -1.73
TRGV3P03979 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms