Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC9.33□□□□□ -0.92
CUX2O14529 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CUX2O14529 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CUX2O14529 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CUX2O14529 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CUX2O14529 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CUX2O14529 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CUX2O14529 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC9.33□□□□□ -0.92
CUX2O14529 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
CUX2O14529 AC063943.1-201ENST00000465434 453 ntBASIC9.33□□□□□ -0.92
CUX2O14529 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC9.33□□□□□ -0.92
CUX2O14529 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC9.33□□□□□ -0.92
CUX2O14529 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CUX2O14529 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CUX2O14529 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CUX2O14529 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
CUX2O14529 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC9.32□□□□□ -0.92
CUX2O14529 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
CUX2O14529 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC9.32□□□□□ -0.92
CUX2O14529 RPL10P10-201ENST00000403509 664 ntBASIC9.32□□□□□ -0.92
CUX2O14529 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
CUX2O14529 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC9.32□□□□□ -0.92
CUX2O14529 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC9.32□□□□□ -0.92
CUX2O14529 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC9.32□□□□□ -0.92
CUX2O14529 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 NDUFA5P8-201ENST00000449019 346 ntBASIC9.32□□□□□ -0.92
CUX2O14529 MED28P5-201ENST00000528254 438 ntBASIC9.32□□□□□ -0.92
CUX2O14529 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
CUX2O14529 FCF1-203ENST00000553615 954 ntTSL 3 BASIC9.32□□□□□ -0.92
CUX2O14529 AL121834.1-201ENST00000572284 509 ntBASIC9.32□□□□□ -0.92
CUX2O14529 AC079414.3-201ENST00000612986 1090 ntBASIC9.32□□□□□ -0.92
CUX2O14529 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
CUX2O14529 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CUX2O14529 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CUX2O14529 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC9.31□□□□□ -0.92
CUX2O14529 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
CUX2O14529 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
CUX2O14529 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CUX2O14529 DOCK11P1-201ENST00000553480 5932 ntBASIC9.31□□□□□ -0.92
CUX2O14529 RNU4-25P-201ENST00000410569 230 ntBASIC9.31□□□□□ -0.92
CUX2O14529 ELOCP19-201ENST00000411919 318 ntBASIC9.31□□□□□ -0.92
CUX2O14529 AC006065.1-201ENST00000422539 802 ntBASIC9.31□□□□□ -0.92
CUX2O14529 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CUX2O14529 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC9.31□□□□□ -0.92
CUX2O14529 RPS4XP20-201ENST00000505751 772 ntBASIC9.31□□□□□ -0.92
CUX2O14529 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC9.31□□□□□ -0.92
CUX2O14529 AC134349.2-201ENST00000535136 910 ntBASIC9.31□□□□□ -0.92
CUX2O14529 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC9.31□□□□□ -0.92
CUX2O14529 AC106785.1-201ENST00000565935 262 ntBASIC9.31□□□□□ -0.92
CUX2O14529 AC024941.1-201ENST00000612250 334 ntBASIC9.31□□□□□ -0.92
CUX2O14529 SPATA31C1-201ENST00000420021 3895 ntBASIC9.31□□□□□ -0.92
CUX2O14529 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
CUX2O14529 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
CUX2O14529 PWAR1-201ENST00000624188 2414 ntBASIC9.31□□□□□ -0.92
CUX2O14529 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
CUX2O14529 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CUX2O14529 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC9.3□□□□□ -0.92
CUX2O14529 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CUX2O14529 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CUX2O14529 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CUX2O14529 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC9.3□□□□□ -0.92
CUX2O14529 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CUX2O14529 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC9.3□□□□□ -0.92
CUX2O14529 AP001324.1-201ENST00000428553 399 ntBASIC9.3□□□□□ -0.92
CUX2O14529 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC9.3□□□□□ -0.92
CUX2O14529 Z95327.1-201ENST00000446082 482 ntBASIC9.3□□□□□ -0.92
CUX2O14529 AL672138.1-201ENST00000450604 1015 ntBASIC9.3□□□□□ -0.92
CUX2O14529 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC9.3□□□□□ -0.92
CUX2O14529 RNU1-88P-201ENST00000459274 128 ntBASIC9.3□□□□□ -0.92
CUX2O14529 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
CUX2O14529 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC9.3□□□□□ -0.92
CUX2O14529 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC9.3□□□□□ -0.92
CUX2O14529 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC9.3□□□□□ -0.92
CUX2O14529 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC9.3□□□□□ -0.92
CUX2O14529 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CUX2O14529 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
CUX2O14529 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
CUX2O14529 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC9.3□□□□□ -0.92
CUX2O14529 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC9.3□□□□□ -0.92
CUX2O14529 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CUX2O14529 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
CUX2O14529 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CUX2O14529 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
CUX2O14529 NACA-203ENST00000454682 6629 ntTSL 5 BASIC9.3□□□□□ -0.92
CUX2O14529 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CUX2O14529 AC010401.2-201ENST00000575137 4934 ntBASIC9.29□□□□□ -0.92
CUX2O14529 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
CUX2O14529 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
CUX2O14529 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
CUX2O14529 AC073143.1-201ENST00000436316 395 ntBASIC9.29□□□□□ -0.92
CUX2O14529 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms