Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1AO00322 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
UPK1AO00322 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
UPK1AO00322 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1AO00322 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
UPK1AO00322 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.13□□□□□ -1.59
UPK1AO00322 OR9K1P-201ENST00000326513 941 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 RN7SKP28-201ENST00000364770 305 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 AC007618.1-201ENST00000366455 732 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 RNA5SP122-201ENST00000384457 108 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 AL121878.1-201ENST00000418638 859 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1AO00322 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1AO00322 RPL19P16-201ENST00000433839 588 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.13□□□□□ -1.59
UPK1AO00322 AC019185.1-201ENST00000442718 389 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1AO00322 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.13□□□□□ -1.59
UPK1AO00322 AL049874.2-201ENST00000492636 288 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 MYL12BP2-201ENST00000503948 512 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 HMGN1P9-201ENST00000515212 298 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1AO00322 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1AO00322 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.13□□□□□ -1.59
UPK1AO00322 AC114947.2-201ENST00000565748 2125 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 AC009852.2-201ENST00000567898 485 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 AP005403.1-201ENST00000579720 229 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 MIR4505-201ENST00000582238 73 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.13□□□□□ -1.59
UPK1AO00322 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.13□□□□□ -1.59
UPK1AO00322 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.13□□□□□ -1.59
UPK1AO00322 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.13□□□□□ -1.59
UPK1AO00322 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 uc_338.7-201ENST00000621834 124 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 AC005261.2-201ENST00000593427 4258 ntBASIC5.13□□□□□ -1.59
UPK1AO00322 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
UPK1AO00322 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1AO00322 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.13□□□□□ -1.59
UPK1AO00322 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1AO00322 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1AO00322 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1AO00322 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.13□□□□□ -1.59
UPK1AO00322 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.13□□□□□ -1.59
UPK1AO00322 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1AO00322 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.12□□□□□ -1.59
UPK1AO00322 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
UPK1AO00322 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
UPK1AO00322 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.12□□□□□ -1.59
UPK1AO00322 RNU4-2-201ENST00000365668 141 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 SNORD56.6-201ENST00000384569 71 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 SDHDP6-201ENST00000414693 480 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 RPS29P14-201ENST00000431518 171 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.12□□□□□ -1.59
UPK1AO00322 HMGN1P36-201ENST00000446623 298 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.12□□□□□ -1.59
UPK1AO00322 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 AC245028.2-201ENST00000458673 253 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 RPL12P24-201ENST00000474907 486 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 AP000797.2-201ENST00000475768 606 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 RPL15P21-201ENST00000495592 567 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 AC074087.1-201ENST00000512059 724 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 CDC42P3-201ENST00000518493 633 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.12□□□□□ -1.59
UPK1AO00322 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.12□□□□□ -1.59
UPK1AO00322 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.12□□□□□ -1.59
UPK1AO00322 AC127024.5-201ENST00000580085 462 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.12□□□□□ -1.59
UPK1AO00322 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.12□□□□□ -1.59
UPK1AO00322 AC015982.1-201ENST00000608113 465 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 AL118522.2-201ENST00000616045 615 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.12□□□□□ -1.59
UPK1AO00322 AC073869.8-201ENST00000641806 335 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
UPK1AO00322 TRIM51GP-201ENST00000534741 1350 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 MTND5P12-201ENST00000502851 1449 ntBASIC5.12□□□□□ -1.59
UPK1AO00322 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.12□□□□□ -1.59
UPK1AO00322 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UPK1AO00322 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
UPK1AO00322 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 AL360270.2-201ENST00000562952 5985 ntBASIC5.11□□□□□ -1.59
UPK1AO00322 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.11□□□□□ -1.59
UPK1AO00322 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UPK1AO00322 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms