Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.81□□□□□ -1.48
YIPF1Q9Y548 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
YIPF1Q9Y548 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.81□□□□□ -1.48
YIPF1Q9Y548 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.81□□□□□ -1.48
YIPF1Q9Y548 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
YIPF1Q9Y548 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
YIPF1Q9Y548 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
YIPF1Q9Y548 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
YIPF1Q9Y548 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 SNX18P3-202ENST00000565670 1750 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC011933.2-201ENST00000578539 2790 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 MRRFP1-201ENST00000435941 1675 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC090220.1-201ENST00000593078 1699 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 U3.2-201ENST00000362981 210 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 SNORA16A-201ENST00000384342 137 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 DHFRP5-201ENST00000406944 564 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 RN7SKP279-201ENST00000411383 298 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 METTL15P3-201ENST00000415522 1221 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 RSL24D1P8-201ENST00000434442 492 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 OR52B5P-201ENST00000435337 951 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 RPS21P4-201ENST00000487122 248 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 MIR3908-201ENST00000579798 126 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC104820.1-201ENST00000624183 307 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 OR52B5P-202ENST00000641118 1110 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AC068769.1-201ENST00000474767 2426 ntBASIC5.8□□□□□ -1.48
YIPF1Q9Y548 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.8□□□□□ -1.48
YIPF1Q9Y548 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC239868.2-201ENST00000564237 4527 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 RNU1-136P-201ENST00000384181 164 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 RNU6-891P-201ENST00000384280 111 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 RANP7-201ENST00000418085 644 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 RNF10P1-201ENST00000418589 369 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC007161.1-204ENST00000423039 460 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC108075.1-201ENST00000424692 529 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 NPM1P22-201ENST00000427761 952 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 DSTNP5-201ENST00000427921 523 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 GAPDHP58-201ENST00000438477 1006 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 RN7SL610P-201ENST00000463845 291 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 ATP5LP5-201ENST00000483050 299 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC093270.2-201ENST00000486157 792 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AP002981.1-201ENST00000517692 975 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC137627.1-201ENST00000545761 289 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 H3F3BP2-201ENST00000583907 357 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 AC020763.5-201ENST00000623298 430 ntBASIC5.79□□□□□ -1.48
YIPF1Q9Y548 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
YIPF1Q9Y548 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms