Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 DNAJA1P4-201ENST00000406473 1166 ntBASIC8□□□□□ -1.13
SHANK2Q9UPX8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 AC002075.1-201ENST00000457396 676 ntBASIC8□□□□□ -1.13
SHANK2Q9UPX8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
SHANK2Q9UPX8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 AC114774.1-201ENST00000507410 1770 ntBASIC8□□□□□ -1.13
SHANK2Q9UPX8 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SHANK2Q9UPX8 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHANK2Q9UPX8 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHANK2Q9UPX8 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHANK2Q9UPX8 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SHANK2Q9UPX8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 PRPF38AP2-201ENST00000438179 851 ntBASIC8□□□□□ -1.13
SHANK2Q9UPX8 AC073072.2-201ENST00000447425 348 ntBASIC8□□□□□ -1.13
SHANK2Q9UPX8 RPL31P44-201ENST00000447680 377 ntBASIC8□□□□□ -1.13
SHANK2Q9UPX8 GTF2F2P1-201ENST00000511083 675 ntBASIC8□□□□□ -1.13
SHANK2Q9UPX8 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 AC016717.3-201ENST00000624730 554 ntBASIC8□□□□□ -1.13
SHANK2Q9UPX8 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC8□□□□□ -1.13
SHANK2Q9UPX8 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 MIR105-1-201ENST00000385222 81 ntBASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 TRY2P-201ENST00000448860 689 ntBASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 AC092647.2-201ENST00000452998 253 ntBASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 RPS4XP20-201ENST00000505751 772 ntBASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 OR4A43P-201ENST00000532938 908 ntBASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 AC112694.2-201ENST00000623697 768 ntBASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SHANK2Q9UPX8 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 AC068538.1-201ENST00000376856 336 ntBASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 AL078599.1-201ENST00000402075 293 ntBASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 AC211486.3-201ENST00000412694 621 ntBASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 AC097484.1-201ENST00000471148 389 ntBASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 AP000797.2-201ENST00000475768 606 ntBASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 RN7SKP147-201ENST00000517154 244 ntBASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 IGHVII-44-2-201ENST00000517728 250 ntBASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 OR4A17P-201ENST00000526032 904 ntBASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SHANK2Q9UPX8 AC011933.2-201ENST00000578539 2790 ntBASIC7.97□□□□□ -1.13
SHANK2Q9UPX8 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHANK2Q9UPX8 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHANK2Q9UPX8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHANK2Q9UPX8 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHANK2Q9UPX8 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SHANK2Q9UPX8 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms