Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AL607077.1-201ENST00000401718 499 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 RPL21P108-201ENST00000413857 481 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AC091390.3-201ENST00000426478 338 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 RPL34P27-201ENST00000428810 349 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AC079922.1-201ENST00000443291 359 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 ARL2BPP10-201ENST00000446487 531 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 RPS7P6-201ENST00000485777 579 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 AC022916.3-201ENST00000592961 742 ntBASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC8.36□□□□□ -1.07
RIMBP3Q9UFD9 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 AC114774.1-201ENST00000507410 1770 ntBASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 SNORA73.1-201ENST00000363107 205 ntBASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 RNU1-13P-201ENST00000384499 162 ntBASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 OR6C69P-201ENST00000394268 893 ntBASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 AL137845.2-201ENST00000444292 988 ntBASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 RN7SKP276-201ENST00000516242 268 ntBASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 KCTD9P4-201ENST00000526766 1166 ntBASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 AL121594.2-201ENST00000541658 472 ntBASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 AC093765.1-201ENST00000603758 881 ntBASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC8.35□□□□□ -1.07
RIMBP3Q9UFD9 AC063976.2-201ENST00000425667 3556 ntBASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 AC006600.2-201ENST00000624834 2506 ntBASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 AL451136.1-201ENST00000435399 325 ntBASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 snoU13.24-201ENST00000458998 104 ntBASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 AC021106.1-201ENST00000509020 1058 ntBASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 AC068831.4-201ENST00000556118 109 ntBASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 AP005432.2-201ENST00000608162 586 ntBASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RIMBP3Q9UFD9 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.08
RIMBP3Q9UFD9 AC108751.5-201ENST00000492880 1336 ntBASIC8.34□□□□□ -1.08
RIMBP3Q9UFD9 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 RSU1P3-201ENST00000412878 835 ntBASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 SOX5P1-201ENST00000524155 1127 ntBASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 OR4A17P-201ENST00000526032 904 ntBASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AL049779.3-201ENST00000557141 606 ntBASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC8.33□□□□□ -1.08
RIMBP3Q9UFD9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms