Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SLC25A51P1-201ENST00000468432 871 ntBASIC5.42□□□□□ -1.54
CHD7Q9P2D1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.42□□□□□ -1.54
CHD7Q9P2D1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 MIR4444-1-201ENST00000581696 74 ntBASIC5.42□□□□□ -1.54
CHD7Q9P2D1 MIR4444-2-201ENST00000584390 74 ntBASIC5.42□□□□□ -1.54
CHD7Q9P2D1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 AC100757.1-201ENST00000616872 1835 ntBASIC5.42□□□□□ -1.54
CHD7Q9P2D1 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 AL137845.2-201ENST00000444292 988 ntBASIC5.42□□□□□ -1.54
CHD7Q9P2D1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.42□□□□□ -1.54
CHD7Q9P2D1 OR7E128P-201ENST00000532736 1024 ntBASIC5.42□□□□□ -1.54
CHD7Q9P2D1 OR8B1P-202ENST00000641132 1178 ntBASIC5.42□□□□□ -1.54
CHD7Q9P2D1 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.42□□□□□ -1.54
CHD7Q9P2D1 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHD7Q9P2D1 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 AL354714.3-201ENST00000447284 493 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 SCARNA22-201ENST00000503991 125 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 AL121873.1-201ENST00000616013 524 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 AC006338.2-201ENST00000616864 791 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 AP003170.5-201ENST00000397185 335 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 AC091912.1-201ENST00000511351 248 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 AC021106.3-201ENST00000623925 531 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 RAD17P2-201ENST00000451754 1977 ntBASIC5.41□□□□□ -1.54
CHD7Q9P2D1 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CHD7Q9P2D1 AL359837.1-201ENST00000381357 287 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 MIR129-1-201ENST00000384972 72 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 YWHABP1-201ENST00000445359 727 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 IGKV2D-10-201ENST00000520194 281 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 RNU1-74P-201ENST00000384108 171 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 Z97832.1-201ENST00000402490 328 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 AL353626.3-201ENST00000413399 657 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 OR52J1P-201ENST00000450596 932 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 AC006967.1-201ENST00000467608 589 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 AC133555.2-201ENST00000550213 292 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 AC021483.2-201ENST00000567415 758 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 BNIP3P33-201ENST00000598912 569 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 AP001885.1-201ENST00000621658 558 ntBASIC5.4□□□□□ -1.54
CHD7Q9P2D1 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.4□□□□□ -1.54
CHD7Q9P2D1 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.4□□□□□ -1.55
CHD7Q9P2D1 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.4□□□□□ -1.55
CHD7Q9P2D1 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHD7Q9P2D1 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms