Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 AC135352.1-201ENST00000506173 1418 ntBASIC7.44□□□□□ -1.22
CUEDC1Q9NWM3 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC009166.2-201ENST00000624410 2833 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 SNORA63C-201ENST00000364578 129 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-707P-201ENST00000364647 95 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 Y_RNA.311-201ENST00000365068 96 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-463P-201ENST00000384340 107 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 PIGPP2-201ENST00000411569 458 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC092042.2-201ENST00000417304 331 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AL161454.1-201ENST00000446226 569 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC087385.2-201ENST00000477729 498 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL338P-201ENST00000481467 293 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 RN7SKP242-201ENST00000515967 289 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC105275.2-201ENST00000567907 711 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 BNIP3P10-201ENST00000605360 577 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AL132765.2-201ENST00000610812 351 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC073862.4-201ENST00000622982 854 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AF001550.2-201ENST00000636643 217 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 AC006058.1-201ENST00000568686 5067 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 CASC19-206ENST00000641028 1430 ntBASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
CUEDC1Q9NWM3 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC138627.1-203ENST00000641872 1680 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 SNORD56.2-201ENST00000363242 71 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 RNA5SP442-201ENST00000365050 107 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 Y_RNA.422-201ENST00000384054 114 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-297P-201ENST00000384636 107 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AL034374.1-201ENST00000406329 351 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 RPL12P10-201ENST00000413498 498 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 RPL26P29-201ENST00000415623 438 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 ZNF90P2-204ENST00000419323 1075 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 SETP9-201ENST00000423837 832 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AL365184.2-201ENST00000431139 435 ntBASIC7.42□□□□□ -1.22
CUEDC1Q9NWM3 AL591212.2-201ENST00000433923 257 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms