Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC079355.1-201ENST00000421770 223 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CISHQ9NSE2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 AL133445.1-201ENST00000467051 452 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 RN7SL447P-201ENST00000494711 245 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 IGKV2-18-201ENST00000522607 343 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 YWHABP2-201ENST00000540201 713 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CISHQ9NSE2 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 AC009027.1-201ENST00000604510 479 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CISHQ9NSE2 MIR6862-1-201ENST00000613016 70 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 MIR6862-2-201ENST00000614755 70 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 AC136428.4-201ENST00000634254 1155 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.73□□□□□ -1.49
CISHQ9NSE2 SAMMSON-209ENST00000641222 1100 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 AC140134.1-201ENST00000511830 3544 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CISHQ9NSE2 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 AC092451.3-201ENST00000625067 1343 ntBASIC5.73□□□□□ -1.49
CISHQ9NSE2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.72□□□□□ -1.49
CISHQ9NSE2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CISHQ9NSE2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CISHQ9NSE2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CISHQ9NSE2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
CISHQ9NSE2 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CISHQ9NSE2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CISHQ9NSE2 RNA5SP487-201ENST00000410186 122 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 NPM1P4-201ENST00000414095 812 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 AC017019.1-201ENST00000426129 261 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CISHQ9NSE2 CFL1P1-202ENST00000432948 411 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CISHQ9NSE2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.72□□□□□ -1.49
CISHQ9NSE2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.72□□□□□ -1.49
CISHQ9NSE2 AC115223.1-201ENST00000466377 870 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 RN7SL423P-201ENST00000486202 304 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CISHQ9NSE2 RPL7L1P4-201ENST00000513004 707 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 ATP5LP3-201ENST00000514223 304 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.72□□□□□ -1.49
CISHQ9NSE2 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.72□□□□□ -1.49
CISHQ9NSE2 RPL10P14-201ENST00000565265 298 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.72□□□□□ -1.49
CISHQ9NSE2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.72□□□□□ -1.49
CISHQ9NSE2 FKBP1AP1-201ENST00000594588 318 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 AL356608.1-201ENST00000610034 820 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 MIR6768-201ENST00000610734 72 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 WBP1LP8-201ENST00000617401 327 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 MIR6729-201ENST00000618194 65 ntBASIC5.72□□□□□ -1.49
CISHQ9NSE2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CISHQ9NSE2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CISHQ9NSE2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CISHQ9NSE2 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CISHQ9NSE2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 SAMM50P1-201ENST00000455403 1399 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 AC079298.1-201ENST00000625026 1619 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CISHQ9NSE2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CISHQ9NSE2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 RN7SKP162-201ENST00000363605 345 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 RN7SKP269-201ENST00000365545 319 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 RPS21P8-201ENST00000413365 247 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 RPL7L1P9-201ENST00000431298 745 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 AC021193.1-201ENST00000511607 420 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 BX510359.5-201ENST00000515651 304 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 CDC42P3-201ENST00000518493 633 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 AC027026.1-201ENST00000532323 742 ntBASIC5.71□□□□□ -1.5
CISHQ9NSE2 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CISHQ9NSE2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CISHQ9NSE2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CISHQ9NSE2 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.71□□□□□ -1.5
CISHQ9NSE2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CISHQ9NSE2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CISHQ9NSE2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CISHQ9NSE2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CISHQ9NSE2 RNA5SP183-201ENST00000362452 119 ntBASIC5.7□□□□□ -1.5
CISHQ9NSE2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CISHQ9NSE2 HSPA8P15-201ENST00000401676 786 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms