Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 AC096921.1-201ENST00000411661 375 ntBASIC3.59□□□□□ -1.83
LYSTQ99698 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC3.59□□□□□ -1.83
LYSTQ99698 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.59□□□□□ -1.83
LYSTQ99698 AC058823.1-201ENST00000485315 474 ntBASIC3.59□□□□□ -1.83
LYSTQ99698 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.59□□□□□ -1.83
LYSTQ99698 AC083829.1-201ENST00000503756 657 ntBASIC3.59□□□□□ -1.83
LYSTQ99698 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.59□□□□□ -1.83
LYSTQ99698 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.59□□□□□ -1.83
LYSTQ99698 AL163952.1-202ENST00000569625 600 ntBASIC3.59□□□□□ -1.83
LYSTQ99698 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 CR381572.2-201ENST00000624852 397 ntBASIC3.59□□□□□ -1.83
LYSTQ99698 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
LYSTQ99698 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LYSTQ99698 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC3.59□□□□□ -1.83
LYSTQ99698 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC3.59□□□□□ -1.83
LYSTQ99698 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.59□□□□□ -1.83
LYSTQ99698 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC3.59□□□□□ -1.83
LYSTQ99698 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.59□□□□□ -1.83
LYSTQ99698 AC084824.1-201ENST00000550917 1005 ntBASIC3.59□□□□□ -1.83
LYSTQ99698 AC125494.2-201ENST00000602431 657 ntBASIC3.59□□□□□ -1.83
LYSTQ99698 AL513327.3-201ENST00000602618 469 ntBASIC3.59□□□□□ -1.83
LYSTQ99698 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.83
LYSTQ99698 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
LYSTQ99698 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LYSTQ99698 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
LYSTQ99698 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC3.59□□□□□ -1.84
LYSTQ99698 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
LYSTQ99698 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
LYSTQ99698 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
LYSTQ99698 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.84
LYSTQ99698 AC005225.5-201ENST00000623547 2225 ntBASIC3.59□□□□□ -1.84
LYSTQ99698 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
LYSTQ99698 AL121977.1-201ENST00000401636 979 ntBASIC3.59□□□□□ -1.84
LYSTQ99698 NANOGP9-201ENST00000439890 892 ntBASIC3.59□□□□□ -1.84
LYSTQ99698 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
LYSTQ99698 AC013356.1-201ENST00000489027 564 ntBASIC3.59□□□□□ -1.84
LYSTQ99698 RNA5SP43-201ENST00000516559 110 ntBASIC3.59□□□□□ -1.84
LYSTQ99698 RNA5SP143-201ENST00000516936 115 ntBASIC3.59□□□□□ -1.84
LYSTQ99698 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.59□□□□□ -1.84
LYSTQ99698 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC3.59□□□□□ -1.84
LYSTQ99698 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC3.59□□□□□ -1.84
LYSTQ99698 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
LYSTQ99698 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.59□□□□□ -1.84
LYSTQ99698 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LYSTQ99698 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LYSTQ99698 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.59□□□□□ -1.84
LYSTQ99698 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
LYSTQ99698 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.84
LYSTQ99698 AC010928.1-201ENST00000592477 1447 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LYSTQ99698 AC083899.1-201ENST00000454465 3819 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC3.58□□□□□ -1.84
LYSTQ99698 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
LYSTQ99698 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC3.58□□□□□ -1.84
LYSTQ99698 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 MIR551A-201ENST00000385042 96 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LYSTQ99698 RPS26P38-201ENST00000414476 348 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 RPEP3-201ENST00000425462 676 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC3.58□□□□□ -1.84
LYSTQ99698 AP001324.1-201ENST00000428553 399 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 HSPD1P12-201ENST00000429127 1069 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 SNORA59A-201ENST00000459326 152 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.58□□□□□ -1.84
LYSTQ99698 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.58□□□□□ -1.84
LYSTQ99698 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC3.58□□□□□ -1.84
LYSTQ99698 MIR3667-201ENST00000581025 74 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.58□□□□□ -1.84
LYSTQ99698 AC079414.3-201ENST00000612986 1090 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
LYSTQ99698 AP001029.2-203ENST00000589795 4910 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LYSTQ99698 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LYSTQ99698 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.58□□□□□ -1.84
LYSTQ99698 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 RMST-209ENST00000639542 3269 ntTSL 5 BASIC3.58□□□□□ -1.84
LYSTQ99698 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 ZNF840P-201ENST00000504759 1996 ntBASIC3.58□□□□□ -1.84
LYSTQ99698 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
LYSTQ99698 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms