Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 RNU1-24P-201ENST00000364285 165 ntBASIC5.1□□□□□ -1.59
VPS13AQ96RL7 NDUFA5P8-201ENST00000449019 346 ntBASIC5.1□□□□□ -1.59
VPS13AQ96RL7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 OR11H3P-201ENST00000554547 982 ntBASIC5.1□□□□□ -1.59
VPS13AQ96RL7 AL163952.1-202ENST00000569625 600 ntBASIC5.1□□□□□ -1.59
VPS13AQ96RL7 AC020915.5-201ENST00000596836 964 ntBASIC5.1□□□□□ -1.59
VPS13AQ96RL7 AC135068.5-201ENST00000624197 983 ntBASIC5.1□□□□□ -1.59
VPS13AQ96RL7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 TBC1D15-217ENST00000550746 6184 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 RPL6P5-201ENST00000445678 828 ntBASIC5.1□□□□□ -1.59
VPS13AQ96RL7 MRPL35P2-201ENST00000448009 511 ntBASIC5.1□□□□□ -1.59
VPS13AQ96RL7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 AL590004.4-201ENST00000566733 7060 ntBASIC5.1□□□□□ -1.59
VPS13AQ96RL7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS13AQ96RL7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AC017079.1-201ENST00000333650 415 ntBASIC5.09□□□□□ -1.59
VPS13AQ96RL7 SNORA71.3-201ENST00000362582 128 ntBASIC5.09□□□□□ -1.59
VPS13AQ96RL7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 TXNP2-201ENST00000443918 295 ntBASIC5.09□□□□□ -1.59
VPS13AQ96RL7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AC006600.2-201ENST00000624834 2506 ntBASIC5.09□□□□□ -1.59
VPS13AQ96RL7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AC004817.4-201ENST00000602396 3625 ntBASIC5.09□□□□□ -1.59
VPS13AQ96RL7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 IGKV7-3-201ENST00000357453 298 ntBASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 RN7SL319P-201ENST00000480656 221 ntBASIC5.09□□□□□ -1.59
VPS13AQ96RL7 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 AC011497.2-201ENST00000600255 639 ntBASIC5.09□□□□□ -1.59
VPS13AQ96RL7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS13AQ96RL7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13AQ96RL7 LINC01963-201ENST00000562038 3148 ntBASIC5.09□□□□□ -1.6
VPS13AQ96RL7 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
VPS13AQ96RL7 AL731556.1-201ENST00000394628 3711 ntBASIC5.09□□□□□ -1.6
VPS13AQ96RL7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
VPS13AQ96RL7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.09□□□□□ -1.6
VPS13AQ96RL7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.09□□□□□ -1.6
VPS13AQ96RL7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.09□□□□□ -1.6
VPS13AQ96RL7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13AQ96RL7 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13AQ96RL7 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS13AQ96RL7 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 MIR551A-201ENST00000385042 96 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 RPL12P39-201ENST00000455456 496 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 YWHABP2-201ENST00000540201 713 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC023575.1-201ENST00000580510 358 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC133552.1-201ENST00000569988 4007 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 SAMMSON-226ENST00000642089 1582 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 RPL23AP17-201ENST00000401064 499 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms