Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC073143.1-201ENST00000436316 395 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AP002812.1-201ENST00000495378 474 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC006427.1-201ENST00000514359 712 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 DHFRP1-201ENST00000579682 559 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC024220.1-201ENST00000603675 484 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 MT-RNR2-201ENST00000387347 1559 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC023818.1-201ENST00000498379 384 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 RNA5SP464-201ENST00000516251 108 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 RN7SKP253-201ENST00000516424 309 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 AP005119.2-201ENST00000579735 1105 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CSMD1Q96PZ7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 KARSP3-201ENST00000571212 1504 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 MIR670-201ENST00000390142 98 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 TMEM183AP1-205ENST00000432739 290 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 AC069200.1-201ENST00000609511 323 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 MAPK10-263ENST00000641052 4307 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 RPS27AP12-201ENST00000429552 465 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 PRSS3P4-201ENST00000453323 162 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 AL356390.1-201ENST00000455684 397 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 RNA5SP392-201ENST00000516905 112 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 RNU1-45P-201ENST00000517191 141 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 AC020915.5-201ENST00000596836 964 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 AC104964.2-201ENST00000562242 4641 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.41□□□□□ -1.7
CSMD1Q96PZ7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 IGKV7-3-201ENST00000357453 298 ntBASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 MIR129-1-201ENST00000384972 72 ntBASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 MIR132-201ENST00000591554 101 ntBASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 MIR6075-201ENST00000620782 95 ntBASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 RNA5SP191-201ENST00000362585 102 ntBASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 ATG4AP1-201ENST00000416893 538 ntBASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 snoU13.24-201ENST00000458998 104 ntBASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 SOX5P1-201ENST00000524155 1127 ntBASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms