Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AP000916.1-201ENST00000533869 835 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 UBE2NP1-201ENST00000545592 458 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 NPM1P5-201ENST00000557228 838 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 RPS4XP21-201ENST00000603814 750 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AL390877.1-201ENST00000605704 214 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AL357140.4-201ENST00000636827 412 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC012213.2-201ENST00000562917 4597 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 NF1P8-201ENST00000415351 1461 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 MKI67P1-201ENST00000604297 1460 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC095038.1-201ENST00000429248 1591 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 Y_RNA.9-201ENST00000362354 101 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 RNU6-1122P-201ENST00000384449 107 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 RNA5SP176-201ENST00000390956 110 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 YWHAZP4-201ENST00000392459 708 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AL133260.1-201ENST00000405720 405 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 RN7SKP188-201ENST00000410789 317 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 VDAC1P2-201ENST00000423609 850 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 CNOT7P1-201ENST00000429006 852 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AL590103.1-201ENST00000434488 307 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 EIF5AP4-201ENST00000441206 465 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 EEF1B2P3-201ENST00000447718 678 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 USP9YP12-201ENST00000450481 570 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AC118758.1-202ENST00000454719 225 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AC116337.2-201ENST00000477662 156 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AC011270.1-201ENST00000558606 583 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 RPS3AP23-202ENST00000574601 686 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AC011921.2-201ENST00000589465 152 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AL499605.1-201ENST00000604628 403 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 MIR6861-201ENST00000618657 64 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AC011008.2-201ENST00000624866 3352 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 AC125238.2-201ENST00000430003 1440 ntBASIC8.29□□□□□ -1.08
TRIM47Q96LD4 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TRIM47Q96LD4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms