Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL078621.3-201ENST00000623707 2042 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 SRRM1P3-201ENST00000426911 2678 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 RNA5SP187-201ENST00000384400 119 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 OR7E156P-201ENST00000400303 464 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL009179.1-201ENST00000406085 265 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL035660.1-201ENST00000422041 222 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 SNRPFP2-201ENST00000440710 251 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL596266.1-201ENST00000448132 400 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL359839.1-201ENST00000451975 1160 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AZGP1P2-201ENST00000454506 345 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 CTSLP6-201ENST00000458273 1002 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 RN7SL188P-201ENST00000469842 285 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 RN7SL170P-201ENST00000487098 295 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 RPL37P23-201ENST00000492641 294 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 SNORA70.20-201ENST00000516848 126 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 MRPS16P1-201ENST00000523462 412 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AC079064.1-201ENST00000528365 362 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 HMGB1P42-201ENST00000532126 553 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 DPPA2P4-201ENST00000563717 878 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 FO681491.1-202ENST00000623392 737 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AC129778.1-202ENST00000623812 261 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL591379.1-207ENST00000635982 261 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AL596275.2-207ENST00000641188 675 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AC027228.2-201ENST00000567141 2154 ntBASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.3□□□□□ -1.56
CLHC1Q8NHS4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AC003973.3-201ENST00000624863 2822 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 SNORD56.6-201ENST00000384569 71 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 HMGB1P20-201ENST00000402555 677 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 RIMKLBP2-201ENST00000424737 654 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AC115283.1-201ENST00000427353 400 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AL022331.1-201ENST00000429025 477 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 TAAR4P-201ENST00000454843 1039 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 UBFD1P1-201ENST00000473259 814 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 RPL7AP10-201ENST00000481016 791 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 OR9N1P-201ENST00000491296 333 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 RN7SL649P-201ENST00000496974 275 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 RNA5SP473-201ENST00000516402 125 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AC060775.1-201ENST00000518241 520 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AP000648.1-201ENST00000529682 397 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AL031601.1-201ENST00000605702 394 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AC009779.8-202ENST00000607990 932 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 RN7SL544P-201ENST00000617232 284 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AP005431.1-201ENST00000618479 319 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 RN7SL763P-201ENST00000620922 284 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AC073593.1-201ENST00000624500 411 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms