Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.4□□□□□ -1.55
CLIP4Q8N3C7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CLIP4Q8N3C7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLIP4Q8N3C7 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLIP4Q8N3C7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLIP4Q8N3C7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CLIP4Q8N3C7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AP004607.3-201ENST00000530354 3915 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 SNORA63.3-201ENST00000362682 132 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 CCNB2P1-201ENST00000399411 1150 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AL356057.1-202ENST00000402263 756 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 MGAT2P2-201ENST00000427194 797 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 PNKDP1-201ENST00000435914 430 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC023141.8-201ENST00000442554 208 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AL157777.1-201ENST00000468100 304 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC092865.4-201ENST00000477936 615 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC093801.2-201ENST00000503966 1050 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 RNU6-1334P-201ENST00000516032 105 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 OR5D2P-201ENST00000524390 911 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 OR7E10P-201ENST00000526420 991 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AL121594.2-201ENST00000541658 472 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 MIR4660-201ENST00000583549 74 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC015911.5-201ENST00000587076 451 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC006116.7-201ENST00000590141 756 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 FAM60CP-201ENST00000591086 664 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AL513327.3-201ENST00000602618 469 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 OR7M1P-201ENST00000608946 533 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC112503.2-201ENST00000609005 552 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AC090912.3-201ENST00000609775 533 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 MIR6809-201ENST00000612189 116 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AL050303.3-201ENST00000613704 284 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AL445493.3-201ENST00000619568 477 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 LINC00216-201ENST00000623548 1126 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 FBXL21-201ENST00000297158 1305 ntBASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP4Q8N3C7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 RNFT1P3-201ENST00000340898 1052 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 RNA5SP232-201ENST00000364144 119 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AL354890.1-201ENST00000413730 346 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 RPL12P43-201ENST00000420608 499 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC005077.1-201ENST00000449226 375 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC098847.1-201ENST00000473094 348 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 PDCL3P4-201ENST00000489621 720 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 RN7SKP238-201ENST00000516483 249 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC113192.3-201ENST00000529152 742 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 OR8X1P-201ENST00000534542 869 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms