Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 NCLP2-201ENST00000416078 1462 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 MSL3P1-202ENST00000440028 1468 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 PSMA6P1-201ENST00000400275 741 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 CYCSP17-201ENST00000407870 315 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 MRPS21P5-201ENST00000417885 231 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 RPL30P16-201ENST00000419341 429 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 SETP9-201ENST00000423837 832 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 OR5BE1P-201ENST00000425977 939 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 RPL7AP23-201ENST00000482625 776 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 DYNLL1P6-201ENST00000503440 264 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC055733.3-201ENST00000505214 523 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC104090.1-201ENST00000506341 1171 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 RNU6-678P-201ENST00000516832 109 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC087808.1-201ENST00000520501 361 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 TOMM20P1-201ENST00000534518 427 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AL121766.1-201ENST00000547436 487 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 OR1E3-201ENST00000575608 948 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC111186.1-201ENST00000604684 130 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC114477.1-201ENST00000605097 605 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 OR5BE1P-202ENST00000641168 1176 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 AC068870.3-201ENST00000625077 2536 ntBASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
NPAS4Q8IUM7 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 OR56B2P-201ENST00000317102 954 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 PPIAP24-201ENST00000328558 471 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 AC114814.2-201ENST00000419195 485 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 RPL23AP19-201ENST00000436229 369 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 NPM1P33-201ENST00000438918 872 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 RPL26P30-201ENST00000453533 435 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 MTCO2P18-201ENST00000457151 658 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 RN7SL870P-201ENST00000460111 296 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 AC084754.1-201ENST00000463466 464 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 AC135721.2-201ENST00000464237 300 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 AC113367.2-201ENST00000505749 160 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 AC021146.8-201ENST00000507455 733 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 MAST4-IT1-201ENST00000514241 658 ntBASIC7.32□□□□□ -1.24
NPAS4Q8IUM7 RNU6-416P-201ENST00000516265 103 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms