Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PACS2Q86VP3 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PACS2Q86VP3 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PACS2Q86VP3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PACS2Q86VP3 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PACS2Q86VP3 MEST-203ENST00000378576 2180 ntTSL 5 BASIC8.17□□□□□ -1.1
PACS2Q86VP3 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
PACS2Q86VP3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PACS2Q86VP3 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
PACS2Q86VP3 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.17□□□□□ -1.1
PACS2Q86VP3 AC097634.1-201ENST00000604491 2467 ntBASIC8.17□□□□□ -1.1
PACS2Q86VP3 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 MAPK10-323ENST00000641493 3207 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 SPATA31C2-201ENST00000324915 3777 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 Y_RNA.25-201ENST00000362528 102 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 CNOT4P1-201ENST00000417432 1199 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 BOLA3P4-201ENST00000418151 400 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC114814.2-201ENST00000419195 485 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AL355863.1-201ENST00000424331 293 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 RPSAP8-201ENST00000429844 889 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC023347.2-201ENST00000433994 462 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC123904.1-201ENST00000441072 368 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 SLC31A1P1-201ENST00000451221 567 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC093799.1-201ENST00000452411 499 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 ARAFP3-201ENST00000454154 490 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 MED28P7-201ENST00000456611 530 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC108693.1-201ENST00000496068 432 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC107222.1-201ENST00000510899 637 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 SNORA48.10-201ENST00000516965 160 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 OR5D2P-201ENST00000524390 911 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 COPS8P3-201ENST00000526024 482 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 ASB8-211ENST00000539528 839 ntTSL 3 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 AL163153.1-201ENST00000554223 283 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 UBE2CP1-201ENST00000557130 554 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 RN7SL474P-201ENST00000583485 301 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 CR769775.3-201ENST00000610388 219 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AL080285.2-201ENST00000612765 458 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 AL606760.4-201ENST00000617613 718 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC234782.5-201ENST00000617723 324 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 MIR7113-201ENST00000621222 59 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC024580.1-201ENST00000623020 674 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 OR5G5P-204ENST00000627642 621 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 AC092821.3-202ENST00000641304 2767 ntBASIC8.16□□□□□ -1.1
PACS2Q86VP3 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.16□□□□□ -1.1
PACS2Q86VP3 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PACS2Q86VP3 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PACS2Q86VP3 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
PACS2Q86VP3 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PACS2Q86VP3 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PACS2Q86VP3 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
PACS2Q86VP3 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC8.15□□□□□ -1.1
PACS2Q86VP3 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC8.15□□□□□ -1.1
PACS2Q86VP3 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
PACS2Q86VP3 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PACS2Q86VP3 AC118282.4-201ENST00000623090 1712 ntBASIC8.15□□□□□ -1.1
PACS2Q86VP3 AL139811.2-201ENST00000373465 1630 ntBASIC8.15□□□□□ -1.1
PACS2Q86VP3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PACS2Q86VP3 RIOK3P1-201ENST00000418778 1528 ntBASIC8.15□□□□□ -1.1
PACS2Q86VP3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms