Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 AC093673.2-201ENST00000609674 331 ntBASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 AC245100.7-201ENST00000609678 442 ntBASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 AC083865.1-201ENST00000636634 831 ntBASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTCHD4Q6ZW05 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 RNA5SP85-201ENST00000365378 119 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 RNU6-31P-201ENST00000384388 108 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 U3.23-201ENST00000391132 200 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AL033519.1-201ENST00000407266 307 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 DEFB130D-201ENST00000426866 237 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AC073410.1-201ENST00000435125 589 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AL353898.1-201ENST00000444055 238 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 NPM1P9-201ENST00000453156 844 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 TRBV5-2-201ENST00000489095 273 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 TPM3P3-201ENST00000521343 354 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AL049779.3-201ENST00000557141 606 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AC067838.1-201ENST00000606064 577 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AL589743.6-201ENST00000611025 117 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 MIR6070-201ENST00000613967 103 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AL355493.4-201ENST00000618530 292 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AC132825.1-201ENST00000463573 2247 ntBASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
PTCHD4Q6ZW05 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 AC079298.1-201ENST00000625026 1619 ntBASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PTCHD4Q6ZW05 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms