Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.12□□□□□ -1.43
VCPP55072 CASC19-248ENST00000641674 1356 ntBASIC6.12□□□□□ -1.43
VCPP55072 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VCPP55072 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.12□□□□□ -1.43
VCPP55072 AC138907.8-201ENST00000623981 2256 ntBASIC6.11□□□□□ -1.43
VCPP55072 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.11□□□□□ -1.43
VCPP55072 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.11□□□□□ -1.43
VCPP55072 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.11□□□□□ -1.43
VCPP55072 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.11□□□□□ -1.43
VCPP55072 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.11□□□□□ -1.43
VCPP55072 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.11□□□□□ -1.43
VCPP55072 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.11□□□□□ -1.43
VCPP55072 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.11□□□□□ -1.43
VCPP55072 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.11□□□□□ -1.43
VCPP55072 AURKAPS1-201ENST00000451805 1212 ntBASIC6.11□□□□□ -1.43
VCPP55072 AZGP1P2-201ENST00000454506 345 ntBASIC6.11□□□□□ -1.43
VCPP55072 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.11□□□□□ -1.43
VCPP55072 RPSAP50-201ENST00000481955 852 ntBASIC6.11□□□□□ -1.43
VCPP55072 PDCL3P4-201ENST00000489621 720 ntBASIC6.11□□□□□ -1.43
VCPP55072 RPL15P21-201ENST00000495592 567 ntBASIC6.11□□□□□ -1.43
VCPP55072 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 RN7SKP66-201ENST00000516681 231 ntBASIC6.11□□□□□ -1.43
VCPP55072 MIR2117-201ENST00000516780 80 ntBASIC6.11□□□□□ -1.43
VCPP55072 OR5D15P-201ENST00000531671 942 ntBASIC6.11□□□□□ -1.43
VCPP55072 AL121594.2-201ENST00000541658 472 ntBASIC6.11□□□□□ -1.43
VCPP55072 NPM1P5-201ENST00000557228 838 ntBASIC6.11□□□□□ -1.43
VCPP55072 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.11□□□□□ -1.43
VCPP55072 AC105036.1-201ENST00000566222 271 ntBASIC6.11□□□□□ -1.43
VCPP55072 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.11□□□□□ -1.43
VCPP55072 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.11□□□□□ -1.43
VCPP55072 AC025857.2-201ENST00000602711 238 ntBASIC6.11□□□□□ -1.43
VCPP55072 AC008115.3-201ENST00000614874 549 ntBASIC6.11□□□□□ -1.43
VCPP55072 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
VCPP55072 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.11□□□□□ -1.43
VCPP55072 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 Z95114.1-201ENST00000624264 14574 ntBASIC6.11□□□□□ -1.43
VCPP55072 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.11□□□□□ -1.43
VCPP55072 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
VCPP55072 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
VCPP55072 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.11□□□□□ -1.43
VCPP55072 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VCPP55072 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
VCPP55072 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.1□□□□□ -1.43
VCPP55072 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VCPP55072 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VCPP55072 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
VCPP55072 AL158152.1-201ENST00000602652 1435 ntBASIC6.1□□□□□ -1.43
VCPP55072 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VCPP55072 AC020656.2-201ENST00000613291 5309 ntBASIC6.1□□□□□ -1.43
VCPP55072 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
VCPP55072 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VCPP55072 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
VCPP55072 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
VCPP55072 MIR141-201ENST00000384975 95 ntBASIC6.1□□□□□ -1.43
VCPP55072 AL645733.1-201ENST00000402250 217 ntBASIC6.1□□□□□ -1.43
VCPP55072 AC016739.1-201ENST00000405359 345 ntBASIC6.1□□□□□ -1.43
VCPP55072 MRPL53P1-201ENST00000414323 319 ntBASIC6.1□□□□□ -1.43
VCPP55072 RPS4XP5-201ENST00000419038 768 ntBASIC6.1□□□□□ -1.43
VCPP55072 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.1□□□□□ -1.43
VCPP55072 AC096775.1-201ENST00000437724 448 ntBASIC6.1□□□□□ -1.43
VCPP55072 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.1□□□□□ -1.43
VCPP55072 RPL12P39-201ENST00000455456 496 ntBASIC6.1□□□□□ -1.43
VCPP55072 GYG1P1-201ENST00000460864 698 ntBASIC6.1□□□□□ -1.43
VCPP55072 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
VCPP55072 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.1□□□□□ -1.43
VCPP55072 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VCPP55072 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.1□□□□□ -1.43
VCPP55072 AC136777.2-201ENST00000522979 358 ntBASIC6.1□□□□□ -1.43
VCPP55072 HMGN2P36-201ENST00000529541 409 ntBASIC6.1□□□□□ -1.43
VCPP55072 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.1□□□□□ -1.43
VCPP55072 AC074050.1-201ENST00000563247 211 ntBASIC6.1□□□□□ -1.43
VCPP55072 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.1□□□□□ -1.43
VCPP55072 AL133481.2-203ENST00000607558 139 ntBASIC6.1□□□□□ -1.43
VCPP55072 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.1□□□□□ -1.43
VCPP55072 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.1□□□□□ -1.43
VCPP55072 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VCPP55072 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.1□□□□□ -1.43
VCPP55072 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VCPP55072 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VCPP55072 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.1□□□□□ -1.43
VCPP55072 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
VCPP55072 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VCPP55072 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VCPP55072 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.1□□□□□ -1.43
VCPP55072 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.1□□□□□ -1.43
VCPP55072 CASC19-260ENST00000641828 2001 ntBASIC6.09□□□□□ -1.43
VCPP55072 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.09□□□□□ -1.43
VCPP55072 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
VCPP55072 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
VCPP55072 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms