Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL139128.1-201ENST00000413921 941 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 SLC35E1P1-201ENST00000419313 864 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.82□□□□□ -1.48
LIMK1P53667 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.82□□□□□ -1.48
LIMK1P53667 AC005297.1-201ENST00000444765 862 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 AC100832.1-201ENST00000471945 383 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 AC079841.1-201ENST00000481228 950 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 EIF1P7-201ENST00000487533 337 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.82□□□□□ -1.48
LIMK1P53667 RN7SKP66-201ENST00000516681 231 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 RPA2P3-201ENST00000533268 770 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK1P53667 AC092865.1-201ENST00000544395 1023 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 OR4H6P-201ENST00000563771 921 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 AC096996.1-201ENST00000563813 325 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK1P53667 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK1P53667 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 AC010487.1-201ENST00000594408 1172 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK1P53667 AC117490.2-201ENST00000610042 594 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 AL021918.2-201ENST00000613415 194 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 AL139407.1-201ENST00000613826 1175 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 MIR8080-201ENST00000622224 89 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 AC105105.5-201ENST00000622635 1294 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
LIMK1P53667 AC025470.1-201ENST00000510053 2032 ntBASIC5.82□□□□□ -1.48
LIMK1P53667 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.82□□□□□ -1.48
LIMK1P53667 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.82□□□□□ -1.48
LIMK1P53667 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.82□□□□□ -1.48
LIMK1P53667 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
LIMK1P53667 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.82□□□□□ -1.48
LIMK1P53667 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
LIMK1P53667 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.82□□□□□ -1.48
LIMK1P53667 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK1P53667 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
LIMK1P53667 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LIMK1P53667 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LIMK1P53667 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 OR13C3-201ENST00000374781 1108 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 RNU11-201ENST00000387069 134 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LIMK1P53667 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 AL645733.1-201ENST00000402250 217 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK1P53667 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK1P53667 AC015977.1-201ENST00000418887 292 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.81□□□□□ -1.48
LIMK1P53667 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.81□□□□□ -1.48
LIMK1P53667 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.81□□□□□ -1.48
LIMK1P53667 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.81□□□□□ -1.48
LIMK1P53667 AL022319.1-201ENST00000458183 1167 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 SEPT7P6-201ENST00000469999 1143 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 RPL7AP6-201ENST00000477943 801 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 CEACAMP10-202ENST00000495431 496 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 RPL15P21-201ENST00000495592 567 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.81□□□□□ -1.48
LIMK1P53667 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.81□□□□□ -1.48
LIMK1P53667 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK1P53667 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK1P53667 HMGB1P42-201ENST00000532126 553 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.81□□□□□ -1.48
LIMK1P53667 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.81□□□□□ -1.48
LIMK1P53667 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK1P53667 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.81□□□□□ -1.48
LIMK1P53667 AL360012.1-201ENST00000602813 131 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 AC012557.1-201ENST00000607115 611 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 AL445222.1-201ENST00000607259 628 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK1P53667 AL359513.1-201ENST00000614364 557 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LIMK1P53667 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LIMK1P53667 AC087516.1-201ENST00000561236 2428 ntBASIC5.81□□□□□ -1.48
LIMK1P53667 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK1P53667 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
LIMK1P53667 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms