Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.68□□□□□ -1.5
HTTP42858 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.68□□□□□ -1.5
HTTP42858 GAPDHP49-201ENST00000421421 961 ntBASIC5.68□□□□□ -1.5
HTTP42858 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.68□□□□□ -1.5
HTTP42858 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.68□□□□□ -1.5
HTTP42858 RPSAP51-201ENST00000497462 645 ntBASIC5.68□□□□□ -1.5
HTTP42858 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
HTTP42858 AC244107.2-201ENST00000611773 76 ntBASIC5.68□□□□□ -1.5
HTTP42858 AL138960.1-201ENST00000613838 513 ntBASIC5.68□□□□□ -1.5
HTTP42858 AC104447.1-201ENST00000624214 2124 ntBASIC5.68□□□□□ -1.5
HTTP42858 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HTTP42858 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 AL590240.1-201ENST00000334118 313 ntBASIC5.68□□□□□ -1.5
HTTP42858 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.68□□□□□ -1.5
HTTP42858 RNU1-74P-201ENST00000384108 171 ntBASIC5.68□□□□□ -1.5
HTTP42858 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
HTTP42858 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.68□□□□□ -1.5
HTTP42858 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.68□□□□□ -1.5
HTTP42858 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.68□□□□□ -1.5
HTTP42858 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC5.67□□□□□ -1.5
HTTP42858 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.67□□□□□ -1.5
HTTP42858 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 RNU1-64P-201ENST00000365443 163 ntBASIC5.67□□□□□ -1.5
HTTP42858 GTF2IP5-201ENST00000414608 731 ntBASIC5.67□□□□□ -1.5
HTTP42858 CBX1P1-201ENST00000440184 427 ntBASIC5.67□□□□□ -1.5
HTTP42858 AL358232.1-201ENST00000448030 501 ntBASIC5.67□□□□□ -1.5
HTTP42858 CT45A11P-201ENST00000448043 1134 ntBASIC5.67□□□□□ -1.5
HTTP42858 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.67□□□□□ -1.5
HTTP42858 AC115286.1-201ENST00000604298 434 ntBASIC5.67□□□□□ -1.5
HTTP42858 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.67□□□□□ -1.5
HTTP42858 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HTTP42858 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HTTP42858 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HTTP42858 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.67□□□□□ -1.5
HTTP42858 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 SNORA71.3-201ENST00000362582 128 ntBASIC5.67□□□□□ -1.5
HTTP42858 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.67□□□□□ -1.5
HTTP42858 RN7SKP260-201ENST00000516907 149 ntBASIC5.67□□□□□ -1.5
HTTP42858 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.67□□□□□ -1.5
HTTP42858 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.67□□□□□ -1.5
HTTP42858 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.67□□□□□ -1.5
HTTP42858 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.67□□□□□ -1.5
HTTP42858 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HTTP42858 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.67□□□□□ -1.5
HTTP42858 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HTTP42858 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC5.66□□□□□ -1.5
HTTP42858 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.66□□□□□ -1.5
HTTP42858 RN7SKP280-201ENST00000364196 304 ntBASIC5.66□□□□□ -1.5
HTTP42858 SNORA66-201ENST00000384792 133 ntBASIC5.66□□□□□ -1.5
HTTP42858 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HTTP42858 AL021331.1-201ENST00000402817 582 ntBASIC5.66□□□□□ -1.5
HTTP42858 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.66□□□□□ -1.5
HTTP42858 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.66□□□□□ -1.5
HTTP42858 BX323845.1-201ENST00000432417 179 ntBASIC5.66□□□□□ -1.5
HTTP42858 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.66□□□□□ -1.5
HTTP42858 AC090058.1-201ENST00000498788 435 ntBASIC5.66□□□□□ -1.5
HTTP42858 NIFKP7-201ENST00000503365 834 ntBASIC5.66□□□□□ -1.5
HTTP42858 AK3P4-201ENST00000504283 583 ntBASIC5.66□□□□□ -1.5
HTTP42858 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.66□□□□□ -1.5
HTTP42858 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.66□□□□□ -1.5
HTTP42858 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.66□□□□□ -1.5
HTTP42858 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.66□□□□□ -1.5
HTTP42858 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.66□□□□□ -1.5
HTTP42858 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.66□□□□□ -1.5
HTTP42858 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.66□□□□□ -1.5
HTTP42858 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HTTP42858 AC006210.2-201ENST00000367074 1545 ntBASIC5.66□□□□□ -1.5
HTTP42858 RNA5SP317-201ENST00000410176 116 ntBASIC5.66□□□□□ -1.5
HTTP42858 RNA5SP311-201ENST00000411290 116 ntBASIC5.66□□□□□ -1.5
HTTP42858 AC124944.2-201ENST00000429866 1242 ntBASIC5.66□□□□□ -1.5
HTTP42858 AC073465.2-201ENST00000440938 498 ntBASIC5.66□□□□□ -1.5
HTTP42858 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.66□□□□□ -1.5
HTTP42858 RNA5SP315-201ENST00000516340 116 ntBASIC5.66□□□□□ -1.5
HTTP42858 RNA5SP312-201ENST00000517068 116 ntBASIC5.66□□□□□ -1.5
HTTP42858 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.66□□□□□ -1.5
HTTP42858 AC005252.1-201ENST00000604518 1063 ntBASIC5.66□□□□□ -1.5
HTTP42858 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HTTP42858 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms