Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.92□□□□□ -1.78
CKS2P33552 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS2P33552 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CKS2P33552 CDC123-202ENST00000378900 933 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS2P33552 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CKS2P33552 FTH1P26-201ENST00000406512 701 ntBASIC3.91□□□□□ -1.78
CKS2P33552 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS2P33552 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS2P33552 NENFP1-201ENST00000419476 466 ntBASIC3.91□□□□□ -1.78
CKS2P33552 OR5M12P-201ENST00000423388 929 ntBASIC3.91□□□□□ -1.78
CKS2P33552 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS2P33552 AC124944.2-201ENST00000429866 1242 ntBASIC3.91□□□□□ -1.78
CKS2P33552 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS2P33552 AC046176.1-201ENST00000435260 1170 ntBASIC3.91□□□□□ -1.78
CKS2P33552 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS2P33552 AC092601.1-201ENST00000444526 383 ntBASIC3.91□□□□□ -1.78
CKS2P33552 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CKS2P33552 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS2P33552 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS2P33552 AL122020.1-201ENST00000472287 459 ntBASIC3.91□□□□□ -1.78
CKS2P33552 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS2P33552 OR11I1P-201ENST00000486033 954 ntBASIC3.91□□□□□ -1.78
CKS2P33552 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS2P33552 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS2P33552 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS2P33552 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.91□□□□□ -1.78
CKS2P33552 MINCR-206ENST00000524335 499 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS2P33552 IGLV3-30-201ENST00000524362 298 ntBASIC3.91□□□□□ -1.78
CKS2P33552 AC131935.1-201ENST00000524621 333 ntBASIC3.91□□□□□ -1.78
CKS2P33552 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CKS2P33552 AP003396.4-201ENST00000527574 265 ntBASIC3.91□□□□□ -1.78
CKS2P33552 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS2P33552 PCNAP4-201ENST00000532690 730 ntBASIC3.91□□□□□ -1.78
CKS2P33552 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.91□□□□□ -1.78
CKS2P33552 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.91□□□□□ -1.78
CKS2P33552 OR11H3P-201ENST00000554547 982 ntBASIC3.91□□□□□ -1.78
CKS2P33552 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC3.91□□□□□ -1.78
CKS2P33552 AP005403.1-201ENST00000579720 229 ntBASIC3.91□□□□□ -1.78
CKS2P33552 MIR4701-201ENST00000583094 63 ntBASIC3.91□□□□□ -1.78
CKS2P33552 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.91□□□□□ -1.78
CKS2P33552 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS2P33552 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC3.91□□□□□ -1.78
CKS2P33552 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 AC004839.1-201ENST00000610269 501 ntBASIC3.91□□□□□ -1.78
CKS2P33552 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS2P33552 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 AC245014.3-201ENST00000618589 347 ntBASIC3.91□□□□□ -1.78
CKS2P33552 AC135068.5-201ENST00000624197 983 ntBASIC3.91□□□□□ -1.78
CKS2P33552 AP003400.3-201ENST00000624904 346 ntBASIC3.91□□□□□ -1.78
CKS2P33552 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC3.91□□□□□ -1.78
CKS2P33552 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
CKS2P33552 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS2P33552 SAMMSON-213ENST00000641336 1521 ntBASIC3.9□□□□□ -1.78
CKS2P33552 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.9□□□□□ -1.78
CKS2P33552 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC3.9□□□□□ -1.78
CKS2P33552 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CKS2P33552 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS2P33552 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS2P33552 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CKS2P33552 AC126323.6-202ENST00000568092 3511 ntBASIC3.9□□□□□ -1.78
CKS2P33552 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.9□□□□□ -1.78
CKS2P33552 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC3.9□□□□□ -1.78
CKS2P33552 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CKS2P33552 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CKS2P33552 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS2P33552 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
CKS2P33552 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CKS2P33552 RNA5SP223-201ENST00000365174 120 ntBASIC3.9□□□□□ -1.79
CKS2P33552 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CKS2P33552 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC3.9□□□□□ -1.79
CKS2P33552 MIR1271-201ENST00000408537 86 ntBASIC3.9□□□□□ -1.79
CKS2P33552 RN7SKP286-201ENST00000410894 299 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AC002524.1-201ENST00000411687 547 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AK4P4-201ENST00000419465 646 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC3.9□□□□□ -1.79
CKS2P33552 SLC25A24P1-202ENST00000434803 1220 ntBASIC3.9□□□□□ -1.79
CKS2P33552 RPEP4-201ENST00000437636 602 ntBASIC3.9□□□□□ -1.79
CKS2P33552 GAPDHP58-201ENST00000438477 1006 ntBASIC3.9□□□□□ -1.79
CKS2P33552 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CKS2P33552 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC3.9□□□□□ -1.79
CKS2P33552 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.9□□□□□ -1.79
CKS2P33552 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CKS2P33552 AL591473.1-201ENST00000464297 313 ntBASIC3.9□□□□□ -1.79
CKS2P33552 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CKS2P33552 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC3.9□□□□□ -1.79
CKS2P33552 AC091544.1-201ENST00000484702 348 ntBASIC3.9□□□□□ -1.79
CKS2P33552 RPL15P21-201ENST00000495592 567 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AC105031.1-201ENST00000518550 476 ntBASIC3.9□□□□□ -1.79
CKS2P33552 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms