Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.84□□□□□ -1.15
RFX1P22670 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.84□□□□□ -1.15
RFX1P22670 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RFX1P22670 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.84□□□□□ -1.15
RFX1P22670 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
RFX1P22670 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.16
RFX1P22670 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
RFX1P22670 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
RFX1P22670 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.16
RFX1P22670 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
RFX1P22670 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.83□□□□□ -1.16
RFX1P22670 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
RFX1P22670 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.83□□□□□ -1.16
RFX1P22670 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.83□□□□□ -1.16
RFX1P22670 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RFX1P22670 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.83□□□□□ -1.16
RFX1P22670 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.83□□□□□ -1.16
RFX1P22670 AC092447.7-201ENST00000422212 1621 ntBASIC7.83□□□□□ -1.16
RFX1P22670 AC090771.1-201ENST00000585803 1618 ntBASIC7.83□□□□□ -1.16
RFX1P22670 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
RFX1P22670 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RFX1P22670 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
RFX1P22670 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 AL161909.1-201ENST00000397390 712 ntBASIC7.83□□□□□ -1.16
RFX1P22670 MIR1204-201ENST00000408388 67 ntBASIC7.83□□□□□ -1.16
RFX1P22670 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.83□□□□□ -1.16
RFX1P22670 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
RFX1P22670 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.83□□□□□ -1.16
RFX1P22670 AL589794.1-201ENST00000424971 390 ntBASIC7.83□□□□□ -1.16
RFX1P22670 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 NEK4P1-201ENST00000433383 879 ntBASIC7.83□□□□□ -1.16
RFX1P22670 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.83□□□□□ -1.16
RFX1P22670 PPIAP17-201ENST00000438507 471 ntBASIC7.83□□□□□ -1.16
RFX1P22670 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.83□□□□□ -1.16
RFX1P22670 AC023271.1-201ENST00000445936 1090 ntBASIC7.83□□□□□ -1.16
RFX1P22670 COX6CP18-201ENST00000448769 222 ntBASIC7.83□□□□□ -1.16
RFX1P22670 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.83□□□□□ -1.16
RFX1P22670 AL603882.1-201ENST00000463059 681 ntBASIC7.83□□□□□ -1.16
RFX1P22670 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.83□□□□□ -1.16
RFX1P22670 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.83□□□□□ -1.16
RFX1P22670 AC008040.4-201ENST00000494834 768 ntBASIC7.83□□□□□ -1.16
RFX1P22670 PABPC1P1-201ENST00000506347 591 ntBASIC7.83□□□□□ -1.16
RFX1P22670 MTCYBP44-201ENST00000514835 823 ntBASIC7.83□□□□□ -1.16
RFX1P22670 NDUFA3P2-201ENST00000531434 232 ntBASIC7.83□□□□□ -1.16
RFX1P22670 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.83□□□□□ -1.16
RFX1P22670 AC016957.1-201ENST00000534895 309 ntBASIC7.83□□□□□ -1.16
RFX1P22670 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.83□□□□□ -1.16
RFX1P22670 AC037479.1-201ENST00000558361 625 ntBASIC7.83□□□□□ -1.16
RFX1P22670 RN7SL66P-201ENST00000582099 264 ntBASIC7.83□□□□□ -1.16
RFX1P22670 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.83□□□□□ -1.16
RFX1P22670 AC109347.2-201ENST00000610220 349 ntBASIC7.83□□□□□ -1.16
RFX1P22670 MIR6780B-201ENST00000610307 79 ntBASIC7.83□□□□□ -1.16
RFX1P22670 AC023509.5-201ENST00000617434 807 ntBASIC7.83□□□□□ -1.16
RFX1P22670 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.83□□□□□ -1.16
RFX1P22670 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC7.83□□□□□ -1.16
RFX1P22670 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.83□□□□□ -1.16
RFX1P22670 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC7.83□□□□□ -1.16
RFX1P22670 AC006453.3-201ENST00000635891 377 ntBASIC7.83□□□□□ -1.16
RFX1P22670 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
RFX1P22670 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.83□□□□□ -1.16
RFX1P22670 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.83□□□□□ -1.16
RFX1P22670 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RFX1P22670 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RFX1P22670 AC092821.3-202ENST00000641304 2767 ntBASIC7.82□□□□□ -1.16
RFX1P22670 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
RFX1P22670 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.82□□□□□ -1.16
RFX1P22670 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.82□□□□□ -1.16
RFX1P22670 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.82□□□□□ -1.16
RFX1P22670 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 SUGT1P2-201ENST00000379452 992 ntBASIC7.82□□□□□ -1.16
RFX1P22670 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 RNY3P10-201ENST00000384764 102 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms