Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC117409.1-201ENST00000470499 1310 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 SNX18P3-202ENST00000565670 1750 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.24□□□□□ -1.57
ZIC3O60481 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
ZIC3O60481 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
ZIC3O60481 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ZIC3O60481 RNA5SP394-201ENST00000364216 119 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 RN7SKP78-201ENST00000364711 318 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 RNU1-59P-201ENST00000364829 162 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 SNORA72.3-201ENST00000365074 132 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ZIC3O60481 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 AL357752.1-201ENST00000412817 349 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 VN1R37P-201ENST00000419096 748 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.24□□□□□ -1.57
ZIC3O60481 AC127526.2-201ENST00000426436 775 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.24□□□□□ -1.57
ZIC3O60481 HMGB3P24-201ENST00000433260 622 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.24□□□□□ -1.57
ZIC3O60481 MOB1AP2-201ENST00000446060 614 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 CLIC4P1-201ENST00000453177 535 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AL358876.1-201ENST00000453364 1075 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.24□□□□□ -1.57
ZIC3O60481 AC004129.2-201ENST00000457229 287 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AC002075.1-201ENST00000457396 676 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AC006539.1-201ENST00000481419 501 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 RN7SL205P-201ENST00000490174 284 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AC009120.1-201ENST00000493458 473 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.24□□□□□ -1.57
ZIC3O60481 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.24□□□□□ -1.57
ZIC3O60481 MTATP6P1-201ENST00000514057 681 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 snoU109.5-201ENST00000516231 132 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ZIC3O60481 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.24□□□□□ -1.57
ZIC3O60481 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.24□□□□□ -1.57
ZIC3O60481 AL121594.2-201ENST00000541658 472 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.24□□□□□ -1.57
ZIC3O60481 AC093014.1-201ENST00000548926 724 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.24□□□□□ -1.57
ZIC3O60481 AC096996.1-201ENST00000563813 325 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.24□□□□□ -1.57
ZIC3O60481 AC015802.2-201ENST00000589690 189 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.24□□□□□ -1.57
ZIC3O60481 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.24□□□□□ -1.57
ZIC3O60481 U1.25-201ENST00000614085 162 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 U1.34-201ENST00000618578 162 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 U1.31-201ENST00000620022 160 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 AC127024.6-201ENST00000621598 424 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.24□□□□□ -1.57
ZIC3O60481 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.24□□□□□ -1.57
ZIC3O60481 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.24□□□□□ -1.57
ZIC3O60481 MIR193BHG-214ENST00000641765 509 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 AP004607.3-201ENST00000530354 3915 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 SAMM50P1-201ENST00000455403 1399 ntBASIC5.24□□□□□ -1.57
ZIC3O60481 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ZIC3O60481 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
ZIC3O60481 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.24□□□□□ -1.57
ZIC3O60481 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZIC3O60481 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
ZIC3O60481 FBXL21-201ENST00000297158 1305 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 MTCO1P4-201ENST00000520516 1409 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 MFSD8-239ENST00000641590 2479 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
ZIC3O60481 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZIC3O60481 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
ZIC3O60481 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
ZIC3O60481 AL159987.1-201ENST00000347911 293 ntBASIC5.23□□□□□ -1.57
ZIC3O60481 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms