Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 MTND1P2-201ENST00000430604 821 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AC112492.2-201ENST00000432774 1030 ntBASIC7.22□□□□□ -1.25
SOX1O00570 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.22□□□□□ -1.25
SOX1O00570 PTMAP6-201ENST00000439110 327 ntBASIC7.22□□□□□ -1.25
SOX1O00570 ATP5LP2-201ENST00000440646 311 ntBASIC7.22□□□□□ -1.25
SOX1O00570 GAPDHP33-201ENST00000443168 1013 ntBASIC7.22□□□□□ -1.25
SOX1O00570 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.22□□□□□ -1.25
SOX1O00570 SDHCP3-201ENST00000445371 506 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.22□□□□□ -1.25
SOX1O00570 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.22□□□□□ -1.25
SOX1O00570 RPL26P30-201ENST00000453533 435 ntBASIC7.22□□□□□ -1.25
SOX1O00570 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 RPL37P25-201ENST00000507308 276 ntBASIC7.22□□□□□ -1.25
SOX1O00570 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.22□□□□□ -1.25
SOX1O00570 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.22□□□□□ -1.25
SOX1O00570 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC7.22□□□□□ -1.25
SOX1O00570 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.22□□□□□ -1.25
SOX1O00570 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7.22□□□□□ -1.25
SOX1O00570 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.22□□□□□ -1.25
SOX1O00570 AP003392.2-201ENST00000527269 208 ntBASIC7.22□□□□□ -1.25
SOX1O00570 OR5AZ1P-201ENST00000527448 943 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AC118273.2-201ENST00000532092 465 ntBASIC7.22□□□□□ -1.25
SOX1O00570 NXPE2P1-201ENST00000543705 726 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.22□□□□□ -1.25
SOX1O00570 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.22□□□□□ -1.25
SOX1O00570 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.22□□□□□ -1.25
SOX1O00570 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC7.22□□□□□ -1.25
SOX1O00570 ACTG1P15-201ENST00000570019 1063 ntBASIC7.22□□□□□ -1.25
SOX1O00570 GLUD1P2-201ENST00000583339 201 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AC020914.7-201ENST00000594477 545 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 BMS1P7-201ENST00000602440 1052 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 AC026367.2-201ENST00000610630 553 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AC013476.2-201ENST00000614456 459 ntBASIC7.22□□□□□ -1.25
SOX1O00570 MIR7854-201ENST00000620068 65 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AC104985.2-201ENST00000620598 500 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AP001264.1-201ENST00000620602 703 ntBASIC7.22□□□□□ -1.25
SOX1O00570 AC099654.12-201ENST00000639868 649 ntBASIC7.22□□□□□ -1.25
SOX1O00570 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.22□□□□□ -1.25
SOX1O00570 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 AL035555.1-201ENST00000404462 1790 ntBASIC7.22□□□□□ -1.25
SOX1O00570 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 AC011477.1-204ENST00000623416 1325 ntBASIC7.22□□□□□ -1.25
SOX1O00570 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
SOX1O00570 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SOX1O00570 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SOX1O00570 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SOX1O00570 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
SOX1O00570 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
SOX1O00570 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SOX1O00570 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
SOX1O00570 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SOX1O00570 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.21□□□□□ -1.25
SOX1O00570 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
SOX1O00570 MTCO1P18-201ENST00000455518 1419 ntBASIC7.21□□□□□ -1.25
SOX1O00570 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SOX1O00570 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
SOX1O00570 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
SOX1O00570 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SOX1O00570 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.21□□□□□ -1.26
SOX1O00570 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SOX1O00570 OR4G2P-201ENST00000328113 903 ntBASIC7.21□□□□□ -1.26
SOX1O00570 IL6STP1-201ENST00000346911 1020 ntBASIC7.21□□□□□ -1.26
SOX1O00570 RNU4-21P-201ENST00000362802 126 ntBASIC7.21□□□□□ -1.26
SOX1O00570 RN7SKP115-201ENST00000363177 317 ntBASIC7.21□□□□□ -1.26
SOX1O00570 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
SOX1O00570 AL079342.2-201ENST00000403367 482 ntBASIC7.21□□□□□ -1.26
SOX1O00570 RPL10P10-201ENST00000403509 664 ntBASIC7.21□□□□□ -1.26
SOX1O00570 SPTLC1P2-201ENST00000407089 121 ntBASIC7.21□□□□□ -1.26
SOX1O00570 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.21□□□□□ -1.26
SOX1O00570 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC7.21□□□□□ -1.26
SOX1O00570 RPL7P8-201ENST00000411964 730 ntBASIC7.21□□□□□ -1.26
SOX1O00570 AL356968.2-201ENST00000412769 1257 ntBASIC7.21□□□□□ -1.26
SOX1O00570 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.21□□□□□ -1.26
SOX1O00570 Z99497.1-201ENST00000421282 135 ntBASIC7.21□□□□□ -1.26
SOX1O00570 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC7.21□□□□□ -1.26
SOX1O00570 MTND3P23-201ENST00000431980 347 ntBASIC7.21□□□□□ -1.26
SOX1O00570 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.21□□□□□ -1.26
SOX1O00570 AL954705.1-201ENST00000435277 559 ntBASIC7.21□□□□□ -1.26
SOX1O00570 AC122718.1-201ENST00000439448 744 ntBASIC7.21□□□□□ -1.26
SOX1O00570 MTND1P30-201ENST00000441241 901 ntBASIC7.21□□□□□ -1.26
SOX1O00570 AC073850.1-201ENST00000449243 255 ntBASIC7.21□□□□□ -1.26
SOX1O00570 AC093392.2-201ENST00000450682 337 ntBASIC7.21□□□□□ -1.26
SOX1O00570 FAM133DP-201ENST00000464802 691 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms