Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 IGHV1-14-201ENST00000523391 241 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 RN7SL339P-201ENST00000580597 296 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 FAM27E4-201ENST00000605259 342 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC097065.2-201ENST00000608159 533 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC138907.10-201ENST00000623708 983 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AL357562.1-201ENST00000624911 609 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AC099654.8-201ENST00000637757 681 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 MIR193BHG-214ENST00000641765 509 ntBASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCDC187A0A096LP49 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC022905.1-201ENST00000503430 3048 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC010132.2-201ENST00000295493 1043 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 MIR16-2-201ENST00000362117 81 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 RPL10P10-201ENST00000403509 664 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 OR3A2-201ENST00000408891 1076 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC093155.2-201ENST00000420734 937 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 MTCO2P17-201ENST00000424336 677 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 RPL23AP23-201ENST00000452590 471 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC239798.3-201ENST00000454459 408 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC083795.1-201ENST00000491760 320 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC082651.2-201ENST00000496833 166 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC121161.1-201ENST00000510606 652 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 RNU5A-7P-201ENST00000515979 116 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 RN7SKP253-201ENST00000516424 309 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC104115.2-201ENST00000523026 687 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AL121579.2-201ENST00000555466 590 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AL356801.1-201ENST00000559320 294 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 MIR4489-201ENST00000578869 62 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC141002.1-201ENST00000607025 279 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AL138960.1-201ENST00000613838 513 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC136428.4-201ENST00000634254 1155 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 FRG1DP-201ENST00000635586 771 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 OR7A1P-202ENST00000641542 1158 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 NCOA4P2-201ENST00000340589 1813 ntBASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC187A0A096LP49 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CCDC187A0A096LP49 AL391261.1-201ENST00000555712 1479 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AC140479.2-201ENST00000421567 3130 ntBASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC187A0A096LP49 AL359715.3-201ENST00000569267 2123 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms